From 0706bddb5c470c2b6464eaea7bde6e225615a806 Mon Sep 17 00:00:00 2001 From: "Adri K. Grow" <42044618+adriannagrow@users.noreply.github.com> Date: Mon, 3 Feb 2025 11:55:40 -0500 Subject: [PATCH] Updated QuickStart EukPhylo (markdown) --- QuickStart-EukPhylo.md | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/QuickStart-EukPhylo.md b/QuickStart-EukPhylo.md index 86c5744..4f577c7 100644 --- a/QuickStart-EukPhylo.md +++ b/QuickStart-EukPhylo.md @@ -168,9 +168,9 @@ Below are several optional ways to parameterize EukPhylo Part 2 |`--sim_taxa`|no|default = None|A file listing taxa (10-digit codes) to apply the similarity filter on (e.g. sim_taxa.txt)| **For removing poor sequences (user informed):** -|Parameter|Options|Help| -|:---|:---|:---| -|`--blacklist`|type = str|A file listing sequence IDs to remove from analysis (e.g. to_remove.txt)| +|Parameter|Description| +|:---|:---| +|`--blacklist`|type = str; A file listing sequence IDs to remove from analysis (e.g. to_remove.txt)| **For removing sequences based on GC composition:**