From 25e89f36dbd34d0b3addb8635f2344f6965fabfd Mon Sep 17 00:00:00 2001 From: "Adri K. Grow" <42044618+adriannagrow@users.noreply.github.com> Date: Tue, 4 Feb 2025 10:10:21 -0500 Subject: [PATCH] Updated QuickStart EukPhylo (markdown) --- QuickStart-EukPhylo.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/QuickStart-EukPhylo.md b/QuickStart-EukPhylo.md index 2aa13a3..c5b1cc7 100644 --- a/QuickStart-EukPhylo.md +++ b/QuickStart-EukPhylo.md @@ -68,7 +68,7 @@ Code parameters: ### Modularity of options and replacing the Hook database EukPhylo part 1 for transcriptomes is composed of 7 scripts. User can choose to start or stop at each step by changing the -1 and/or -2 options. -If a user choose to use their own gene families database, they need to replace the Hook.fasta file in the Database folder, and build a diamond version of their own file; with adjusting the naming system of sequences as the only requirement. +If a user chooses to use their own gene family database, they need to replace the Hook.fasta file in the Databases folder and build a diamond version of their own file; with adjusting the naming system of sequences as the only requirement. To add the XPC option, only available for transcriptomes, user need to add the -x option in their command line.