From 74295c443d128d2bd2d6871bc8b6901d6c66a40b Mon Sep 17 00:00:00 2001 From: "Adri K. Grow" <42044618+adriannagrow@users.noreply.github.com> Date: Tue, 4 Feb 2025 10:07:44 -0500 Subject: [PATCH] Updated QuickStart EukPhylo (markdown) --- QuickStart-EukPhylo.md | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/QuickStart-EukPhylo.md b/QuickStart-EukPhylo.md index d2664b1..dd00bee 100644 --- a/QuickStart-EukPhylo.md +++ b/QuickStart-EukPhylo.md @@ -47,9 +47,9 @@ EukPhylo part 1 runs CDS (genome) or assembled transcripts (transcriptome) throu * A folder called “Scripts” with scripts from [here](https://github.com/Katzlab/PhyloToL-6/tree/main/PTL1/Transcriptomes/Scripts) on GitHub ### Running: -``` +` python wrapper.py -1 1 -2 7 --assembled_transcripts AssembledTranscripts -o Output_Folder --genetic_code Universal -d Databases > log.txt -``` +` Code parameters: | Parameter | Description|