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Update and rename Query_SRA_egs.py to QuerySRA_v1.0.py

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Godwin Ani 2024-01-15 15:05:23 -05:00 committed by GitHub
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Utilities/for_taxonomy/Query_SRA_egs.py → Utilities/for_taxonomy/QuerySRA_v1.0.py
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@ -4,7 +4,7 @@
#Dependencies: Python3, Biopython
#Inputs: Folder named 'unique_taxon_lists' with files of keywords by major clade (separated by new lines).
#Outputs: File of species, IDs, and GCA or SRR codes AND a file with uniquified codes.
#Example: python Query_SRA_egs.py -t (transcriptome, SRA db) or -g (genome, assembly db)
#Example: python QuerySRA_v1.0.py -t (transcriptome, SRA db) or -g (genome, assembly db)
'''
from Bio import Entrez