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![Lab image](Katzlab.png)
# PhyloToL-6 # PhyloToL-6
An updated version of PhyloToL started in 2023 An updated version of PhyloToL started in 2023
[PTL1](https://github.com/Katzlab/PhyloToL-6/tree/main/PTL1) includes scripts for assigning transcripts and cds' to gene familes (OGs) [PTL1](/PTL1) includes scripts for assigning transcripts and cds' to gene familes (OGs)
[PTL2](https://github.com/Katzlab/PhyloToL-6/tree/main/PTL2) is a repository for main MSA and tree building scripts [PTL2](/PTL2) is a repository for main MSA and tree building scripts
[HookDB](https://github.com/Katzlab/PhyloToL-6/tree/main/HookDB) is our set of eukaryotic gene families, a subsample of gene families from orthomcl 6 [HookDB](/HookDB) is our set of eukaryotic gene families, a subsample of gene families from orthomcl 6
[Utilities](https://github.com/Katzlab/PhyloToL-6/tree/main/Utilities) includes many useful tools for analyzing sequence data. [Utilities](/Utilities) includes many useful tools for analyzing sequence data.