YuuMJ1997/EukPhylo
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Notes in run_eukphylo.sh, further updates needed

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Auden Cote-L'Heureux 2025-01-19 10:27:34 -05:00 committed by GitHub
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PTL2/run_eukphylo.sh
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@ -45,6 +45,6 @@ module load conda/latest
conda activate /work/pi_lkatz_smith_edu/Conda_PTL6p2/envs/PTL/ conda activate /work/pi_lkatz_smith_edu/Conda_PTL6p2/envs/PTL/
parent='/work/pi_lkatz_smith_edu/' #add your path startin> parent='/work/pi_lkatz_smith_edu/' #add your path startin>
#if you are running batches, you need an srun line for each batch! #if you are running batches, you need an srun line for each batch!
srun -D ${parent} python3 ${parent}Scripts/eukphylo.py --similarity_filter --sim_cutoff 0.99 --> srun -D ${parent} python3 ${parent}Scripts/eukphylo.py --similarity_filter --sim_cutoff 0.99 ## This line is incomplete
wait wait
###Unity end ###Unity end