From 3731c95527999987fede8b48e8ef9e35aca5ac3d Mon Sep 17 00:00:00 2001
From: Godwin Ani <aniigodwinn@gmail.com>
Date: Wed, 5 Mar 2025 16:12:21 -0500
Subject: [PATCH] Update README.md

---
 README.md | 6 ++----
 1 file changed, 2 insertions(+), 4 deletions(-)

diff --git a/README.md b/README.md
index f063f52..8dcdedc 100644
--- a/README.md
+++ b/README.md
@@ -11,10 +11,8 @@ EukPhylo is an updated version of the PhyloToL pipeline from the [Katz Lab](http
 The docker file can be executed with:
 
 ```bash
-cd EukPhylo
-
 # Build the container
-docker build -f Dockerfile . --tag MyEuk:1
+docker build -f Dockerfile.txt . --tag eukphylo:1
 
 # Get the container IMAGE_ID
 docker image list
@@ -24,7 +22,7 @@ docker run -it \
     --mount type=bind,src=$(pwd)/databases,dst=/Databases \
     --mount type=bind,src=$(pwd)/input_data,dst=/Input_data \
     --mount type=bind,src=$(pwd)/output_data,dst=/Output_data \
-    {IMAGE_ID}
+    eukphylo
 ```
 
 After development, GitHub CICD workflows can be added to automatically build and release the dockerfile for the end user.