diff --git a/PTL1/Genomes/Scripts/wrapper.py b/PTL1/Genomes/Scripts/wrapper.py index 3988d0b..06209f6 100644 --- a/PTL1/Genomes/Scripts/wrapper.py +++ b/PTL1/Genomes/Scripts/wrapper.py @@ -1,7 +1,7 @@ # Last updated Sept 2023 # Author: Auden Cote-L'Heureux -# This script is a WRAPPER for the PhyloToL Part 1 GENOMES pipeline. Users should +# This script is a WRAPPER for the EukPhylo Part 1 GENOMES pipeline. Users should # use this script to run the pipeline, rather than running any of the sub-scripts (number 1a through 5b) # independently. To run an individual step in the pipeline, use --script X where X is the number (1 through 5). # To run multiple sets (usually all of them), use --first script 1 --last_script 5, or whichever first @@ -19,8 +19,8 @@ import CheckSetup def get_args(): parser = argparse.ArgumentParser( - prog = 'PhyloToL v6.0 Part 1 for GenBank Genomes', - description = "Updated January 19th, 2023 by Auden Cote-L'Heureux. Link to GitHub: https://github.com/AudenCote/PhyloToL_v6.0" + prog = 'EukPhylo Part 1 for GenBank Genomes', + description = "Updated January 19th, 2023 by Auden Cote-L'Heureux. Link to GitHub: https://github.com/Katzlab/EukPhylo" ) parser.add_argument('-s', '--script', default = -1, type = int, choices = { 1, 2, 3, 4, 5 }, help = 'Script to run if you are only running one script')