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Purple color for EE

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Katzlab 2024-06-06 17:23:26 -04:00 committed by GitHub
parent fd7b2e7302
commit 436cad7238
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GPG Key ID: B5690EEEBB952194
1 changed files with 2 additions and 2 deletions
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4
Utilities/for_trees/ColorByClade.py
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@ -83,7 +83,7 @@ figtree_format = '''begin figtree;
set tipLabels.colorAttribute="User selection";
set tipLabels.displayAttribute="Names";
set tipLabels.fontName="sansserif";
set tipLabels.fontSize=12;
set tipLabels.fontSize=16;
set tipLabels.fontStyle=0;
set tipLabels.isShown=true;
set tipLabels.significantDigits=4;
@ -242,7 +242,7 @@ def color(file, args):
else:
print('\nERROR: your input keyfile could not be found\n')
else:
colors = { 'Ba' : '[&!color=#000000]', 'Za' : '[&!color=#808080]', 'Sr' : '[&!color=#B4A26D]', 'Op' : '[&!color=#1260CC]', 'Pl' : '[&!color=#026736]', 'Ex' : '[&!color=#E63B60]', 'EE' : '[&!color=#C76A6A]', 'Am' : '[&!color=#29C5F6]', 'EE_cr' : '[&!color=#08B461]', 'EE_ha' : '[&!color=#03EA74]', 'Sr_ci' : '[&!color=#A97533]', 'Sr_ap' : '[&!color=#D4BA99]', 'Sr_rh' : '[&!color=#8A3324]', 'Sr_st' : '[&!color=#E97451]', 'Sr_di' : '[&!color=#492815]' }
colors = { 'Ba' : '[&!color=#000000]', 'Za' : '[&!color=#808080]', 'Sr' : '[&!color=#B4A26D]', 'Op' : '[&!color=#1260CC]', 'Pl' : '[&!color=#026736]', 'Ex' : '[&!color=#E63B60]', 'EE' : '[&!color=#9347c9]', 'Am' : '[&!color=#29C5F6]', 'EE_cr' : '[&!color=#08B461]', 'EE_ha' : '[&!color=#03EA74]', 'Sr_ci' : '[&!color=#A97533]', 'Sr_ap' : '[&!color=#D4BA99]', 'Sr_rh' : '[&!color=#8A3324]', 'Sr_st' : '[&!color=#E97451]', 'Sr_di' : '[&!color=#492815]' }
newick = get_newick(file)