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Update wrapper_submit.sh

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Godwin Ani 2025-03-17 18:53:21 -04:00 committed by GitHub
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1 changed files with 2 additions and 2 deletions
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PTL1/Transcriptomes/Scripts/wrapper_submit.sh
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@ -12,14 +12,14 @@
# A simple run that goes from script 1 to script 7 (the last script) using the Universal genetic code # A simple run that goes from script 1 to script 7 (the last script) using the Universal genetic code
parent='/EukPhylo/PTL1/Transcriptomes/' parent='/EukPhylo/PTL1/Transcriptomes/Scripts'
out_dir='/Output_data' out_dir='/Output_data'
in_dir='/Input_data' in_dir='/Input_data'
## EXAMPLE RUN COMMANDS BELOW ## EXAMPLE RUN COMMANDS BELOW
# A simple run of part 1 # A simple run of part 1
python3 ${parent}/Scripts/wrapper.py \ python3 ${parent}/wrapper.py \
--first_script 1 \ --first_script 1 \
--last_script 7 \ --last_script 7 \
--assembled_transcripts ${in_dir} \ --assembled_transcripts ${in_dir} \