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updating header in preguidance.py

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Auden Cote-L'Heureux 2025-01-19 11:07:49 -05:00 committed by GitHub
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commit 676a11a287
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1 changed files with 2 additions and 2 deletions
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PTL2/Scripts/preguidance.py
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@ -2,7 +2,7 @@
# Authors: Auden Cote-L'Heureux, Mario Ceron-Romero, Godwin Ani # Authors: Auden Cote-L'Heureux, Mario Ceron-Romero, Godwin Ani
# This script is only run when --start = unaligned. This typically means that a user # This script is only run when --start = unaligned. This typically means that a user
# is inputting ReadyToGo files as output by PhyloToL 6 part 1. The script contains two optional # is inputting ReadyToGo files as output by EukPhylo part 1. The script contains two optional
# filters. One filter aims to remove sequences outside silent-site GC content ranges set by # filters. One filter aims to remove sequences outside silent-site GC content ranges set by
# the user, and relies on the output of the utility script ‘GC_Identifier_v1.0.py.’ See the manual # the user, and relies on the output of the utility script ‘GC_Identifier_v1.0.py.’ See the manual
# for details on using this filter. Sequence filtration by composition is set using the --og_prefix # for details on using this filter. Sequence filtration by composition is set using the --og_prefix
@ -27,7 +27,7 @@
import os, sys, re import os, sys, re
from Bio import SeqIO from Bio import SeqIO
#This function is called ONLY in phylotol.py. #This function is called ONLY in eukphylo.py.
def run(params): def run(params):
#Reading in the list of gene families to use (--gf_list) #Reading in the list of gene families to use (--gf_list)