diff --git a/Utilities/For_Assemblies/plot_assemblies.R b/Utilities/For_Assemblies/plot_assemblies.R index 2691b8b..c55af23 100644 --- a/Utilities/For_Assemblies/plot_assemblies.R +++ b/Utilities/For_Assemblies/plot_assemblies.R @@ -1,3 +1,11 @@ +#Author, date: Elinor Sterner(esterner27@gmail.com), March 2023. +#Motivation: To describe transcriptomes. +#Intent: Plot length, coverage and GC of assembled transcripts with stats generated from assess_transcriptomes.py. +#Dependencies: Python3 +#Inputs: assess_transcriptomes.py output (assembly_assessment.csv) +#Outputs: Several plots showing the distribution of length, GC content, and Coverage. + + library(ggplot2) library(tidyverse) library(scales)