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updating header in trees.py

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Auden Cote-L'Heureux 2025-01-19 11:08:08 -05:00 committed by GitHub
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commit 743d650b74
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1 changed files with 2 additions and 2 deletions
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PTL2/Scripts/trees.py
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@ -2,7 +2,7 @@
# Authors: Auden Cote-L'Heureux and Mario Ceron-Romero
# This is a relatively simple script that only runs trees, using either IQ-Tree
# or RAxML. The run() function is called in two places: both in phylotol.py, and
# or RAxML. The run() function is called in two places: both in eukphylo.py, and
# in contamination.py, where it is used to re-build trees. When starting at this
# step, users must input one aligned amino acid fasta file per OG. Otherwise, if
# starting at the pre-Guidance or Guidance steps, this step will be run if --end = trees.
@ -12,7 +12,7 @@ import os, sys, re
from Bio import SeqIO
from color import color
#Called in phylotol.py and contamination.py
#Called in eukphylo.py and contamination.py
def run(params):
#Checking whether aligned files were input, or it should just start with the Guidance outputs from the previous step.