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Update CUB.py

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Godwin Ani 2024-06-03 15:56:43 -04:00 committed by GitHub
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Utilities/for_fastas/CUB.py
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#Dependencies: Python3, numpy, BioPython #Dependencies: Python3, numpy, BioPython
#Inputs: Fasta file or folder of fasta files #Inputs: Fasta file or folder of fasta files
#Outputs: A fasta file filtered for properly formatted sequences and several spreadsheets summarizing GC, ENc, RSCU, etc. #Outputs: A fasta file filtered for properly formatted sequences and several spreadsheets summarizing GC, ENc, RSCU, etc.
#Example: python3 CUB_v2.1.py -i seqs.fasta #Example: python3 CUB.py -i seqs.fasta
#Dependencies #Dependencies
import os import os