YuuMJ1997/EukPhylo
1
0
Fork 0
mirror of http://43.156.76.180:8026/YuuMJ/EukPhylo.git synced 2025-12-28 03:50:25 +08:00
Code Issues Packages Projects Releases Wiki Activity

Fixing 4-fold family error in CUB.py

Browse Source
This commit is contained in:
Auden Cote-L'Heureux 2023-08-21 12:47:14 -04:00 committed by GitHub
parent 42ff780332
commit a24a546ade
No known key found for this signature in database
GPG Key ID: 4AEE18F83AFDEB23
1 changed files with 1 additions and 1 deletions
Show Stats Download Patch File Download Diff File Expand all files Collapse all files

2
PTL1/Transcriptomes/Scripts/CUB.py
View File

@ -367,7 +367,7 @@ class GCeval():
# # This function return the GC content of the third position of four-fold # # This function return the GC content of the third position of four-fold
# # degenerate codons # # degenerate codons
FrFold = round(GC(''.join([k[-1]*v[-1] for k, v in cdnTbl.items() if FrFold = round(GC(''.join([k[-1]*v[-1] for k, v in cdnTbl.items() if
'one' not in v[1]])), 4) v[1] == 'four'])), 4)
return FrFold return FrFold
class SeqInfo(object): class SeqInfo(object):