From ac36890622df06ac17e63b0136efb84aa355e23c Mon Sep 17 00:00:00 2001 From: Godwin Ani Date: Mon, 3 Jun 2024 16:00:31 -0400 Subject: [PATCH] Update and rename QuerySRA_v1.0.py to QuerySRA.py --- Utilities/for_taxonomy/{QuerySRA_v1.0.py => QuerySRA.py} | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) rename Utilities/for_taxonomy/{QuerySRA_v1.0.py => QuerySRA.py} (98%) diff --git a/Utilities/for_taxonomy/QuerySRA_v1.0.py b/Utilities/for_taxonomy/QuerySRA.py similarity index 98% rename from Utilities/for_taxonomy/QuerySRA_v1.0.py rename to Utilities/for_taxonomy/QuerySRA.py index 3881496..ea6e8ff 100644 --- a/Utilities/for_taxonomy/QuerySRA_v1.0.py +++ b/Utilities/for_taxonomy/QuerySRA.py @@ -4,7 +4,7 @@ #Dependencies: Python3, Biopython #Inputs: Folder named 'unique_taxon_lists' with files of keywords by major clade (separated by new lines). #Outputs: File of species, IDs, and GCA or SRR codes AND a file with uniquified codes. -#Example: python QuerySRA_v1.0.py -t (transcriptome, SRA db) or -g (genome, assembly db) +#Example: python QuerySRA.py -t (transcriptome, SRA db) or -g (genome, assembly db) ''' from Bio import Entrez