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Update and rename phylotol.py to eukphylo.py

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Auden Cote-L'Heureux 2025-01-17 10:16:27 -05:00 committed by GitHub
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PTL2/Scripts/phylotol.py → PTL2/Scripts/eukphylo.py
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@ -2,7 +2,7 @@
# Author: Auden Cote-L'Heureux # Author: Auden Cote-L'Heureux
# This script is what users should call when running any or all components of # This script is what users should call when running any or all components of
# PhyloToL 6 part 2. It briefly determines which parts of the pipeline should be # EukPhylo part 2. It briefly determines which parts of the pipeline should be
# run (pre-Guidance, Guidance, tree building, contamination loop, and/or # run (pre-Guidance, Guidance, tree building, contamination loop, and/or
# concatenation) based on the --start and --end parameters, and then runs all # concatenation) based on the --start and --end parameters, and then runs all
# of these components. Each component is actually run by the run() function in # of these components. Each component is actually run by the run() function in