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Update ReadMapping_v2.0.py

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Godwin Ani 2024-01-15 15:02:24 -05:00 committed by GitHub
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Utilities/for_taxonomy/ReadMapping_v2.0.py
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#Dependencies: Python3, hisat2, samtools, sambamba #Dependencies: Python3, hisat2, samtools, sambamba
#Inputs: Folder named 'TrimmedReads' containing all the trimmed reads. #Inputs: Folder named 'TrimmedReads' containing all the trimmed reads.
#Outputs: Folders with the names of the LKHs containing the sam/bam files. #Outputs: Folders with the names of the LKHs containing the sam/bam files.
#Example: python readmapping.py #Example: python ReadMapping_v2.0.py
''' '''
import os import os