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Update Trim_Reads.py

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Adri K. Grow 2025-06-16 11:25:08 -04:00 committed by GitHub
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Utilities/For_Assemblies/Trim_Reads.py
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@ -7,6 +7,7 @@
#Inputs: parameters.txt, fastq.gz forward and reverse reads #Inputs: parameters.txt, fastq.gz forward and reverse reads
#Outputs:trimmed reads in ToAssemble folder #Outputs:trimmed reads in ToAssemble folder
#Example: python3 Trim_Reads.py parameter.txt #Example: python3 Trim_Reads.py parameter.txt
#Katzlab parameters are 24 for quality trimming and 75 for minimum length as of June 2025
from Bio import SeqIO from Bio import SeqIO