From db22976d3c30cc1da83648c612f223caabc51a6d Mon Sep 17 00:00:00 2001 From: Auden Cote-L'Heureux <52716489+AudenCote@users.noreply.github.com> Date: Sun, 19 Jan 2025 11:02:43 -0500 Subject: [PATCH] Updating header in 6_FilterPartials.py --- PTL1/Transcriptomes/Scripts/6_FilterPartials.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/PTL1/Transcriptomes/Scripts/6_FilterPartials.py b/PTL1/Transcriptomes/Scripts/6_FilterPartials.py index 47377af..74fe65c 100644 --- a/PTL1/Transcriptomes/Scripts/6_FilterPartials.py +++ b/PTL1/Transcriptomes/Scripts/6_FilterPartials.py @@ -6,7 +6,7 @@ # from the same OG in the Hook database are removed. Then, for each transcriptomic sample, # all sequences within an OG are compared at the nucleotide level to the sequence with the # highest “score” (defined as k-mer coverage multiplied by length). The script should be run -# as part of the PhyloToL 6 Part 1 pipeline using the script wrapper.py. It requires that the +# as part of the EukPhylo Part 1 pipeline using the script wrapper.py. It requires that the # structure of the 'Output' folder be as output by script 5, and that the Databases/db_OG folder # contains a .fasta file containing all amino acid sequences in the OG reference database (Hook) # with the same file name (until the extension) as the .dmnd file for the reference database used