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Update and rename rename_tip_labels.py to RenameTips_v1.0.py

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Godwin Ani 2024-01-15 15:00:53 -05:00 committed by GitHub
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Utilities/for_trees/rename_tip_labels.py → Utilities/for_trees/RenameTips_v1.0.py
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@ -6,7 +6,7 @@ Dependencies : Python3, Pandas
Inputs : A folder containing trees and a csv file(with headers).
The first column of the csv is the 10 digit code and other columns are the information to be added to the tip labels.
Outputs : A folder of trees with renamed tips.
python3 rename_tip_labels.py -i input to_folder_of_trees -s to_spreadsheet
python3 RenameTips_v1.0.py -i input to_folder_of_trees -s to_spreadsheet
'''
import os, re, sys, argparse