YuuMJ1997/EukPhylo
1
0
Fork 0
mirror of http://43.156.76.180:8026/YuuMJ/EukPhylo.git synced 2025-12-27 12:30:25 +08:00
Code Issues Packages Projects Releases Wiki Activity

Updating header in 2a_Identify_rRNA.py

Browse Source
This commit is contained in:
Auden Cote-L'Heureux 2024-01-16 14:10:53 -05:00 committed by GitHub
parent e78d73ca25
commit e3077b1caa
No known key found for this signature in database
GPG Key ID: B5690EEEBB952194
1 changed files with 5 additions and 1 deletions
Show Stats Download Patch File Download Diff File Expand all files Collapse all files

6
PTL1/Transcriptomes/Scripts/2a_Identify_rRNA.py
View File

@ -1,7 +1,11 @@
# Last updated 8/18/2017 # Last updated 8/18/2017
# Authors: Xyrus Maurer-Alcala
# This script is intended to identify and isolate SSU/LSU sequences by BLASTn-ing # This script is intended to identify and isolate SSU/LSU sequences by BLASTn-ing
# all length-filtered assembled transcripts against a reference database. # all length-filtered assembled transcripts against a reference database. It then
# writes these sequences into a separate file, removing them from the remainder
# of the sequences that will go forwards for gene family assignment. This script
# should be in Part 1 of the PhyloToL version 6 pipeline using the script wrapper.py.
# You must run Script 1a before this step. Optionally, you may also have run Script 1b. # You must run Script 1a before this step. Optionally, you may also have run Script 1b.
# Before running this script, ensure that you have a properly formatted rRNA reference # Before running this script, ensure that you have a properly formatted rRNA reference