diff --git a/PTL1/Genomes/Scripts/4_CountOGsDiamond.py b/PTL1/Genomes/Scripts/4_CountOGsDiamond.py index 7e50a52..23fe874 100644 --- a/PTL1/Genomes/Scripts/4_CountOGsDiamond.py +++ b/PTL1/Genomes/Scripts/4_CountOGsDiamond.py @@ -262,7 +262,7 @@ def update_fasta(args): keep_dict = { } for line in keep: og_number = re.split('OG.{1}_', line.split('\t')[1])[1][:6] - og_prefix = line.split('\t')[1].split(og_number)[0][-4:] + og_prefix = line.split('\t')[1].split(og_number)[-2][-4:] og = og_prefix + og_number keep_dict.update({ re.split('_OG.{1}_', line.split('\t')[0])[0] : re.split('_OG.{1}_', line.split('\t')[0])[0] + '_' + og_prefix + line.split('\t')[1].split('_')[-1] })