diff --git a/Utilities/for_fastas/Cluster_v2.0.py b/Utilities/for_fastas/Cluster_v2.0.py index f17c147..c664922 100644 --- a/Utilities/for_fastas/Cluster_v2.0.py +++ b/Utilities/for_fastas/Cluster_v2.0.py @@ -52,11 +52,11 @@ def main(): os.mkdir(args.output) if args.type == 'aa': - threshold = input_validation(args.threshold, 'ERROR! Use format 0.## for Amino acids sequence identity threshold.') + threshold = input_validation(args.identity, 'ERROR! Use format 0.## for Amino acids sequence identity threshold.') overlap = input_validation(args.overlap, 'ERROR! Use format 0.## for Amino acids sequence alignment overlap value.') cluster_sequences('cd-hit', threshold, overlap, args.input, args.output) elif args.type == 'dna': - threshold = input_validation(args.threshold, 'ERROR! Use format 0.## for DNA sequence identity threshold.') + threshold = input_validation(args.identity, 'ERROR! Use format 0.## for DNA sequence identity threshold.') overlap = input_validation(args.overlap, 'ERROR! Use format 0.## for DNA sequence alignment overlap value.') cluster_sequences('cd-hit-est', threshold, overlap, args.input, args.output) else: