bootstrap_test
bootstrap_test.debug
bootstrap_test.out.tmp
checkTreeLikelihoodGivenBranches
checkTreeLikelihoodGivenBranches.out.tmp
computeNJtreeJCmodel
computeNJtreeJCmodel.out.tmp
doubleRep
doubleRep.out.tmp
given2seqEstimateTheDistBetweenThem
given2seqEstimateTheDistBetweenThem.out.tmp
given2seqEstimateTheDistBetweenThemGamma
given2seqEstimateTheDistBetweenThemGamma.out.tmp
given2seqEstimateTheDistanceK2P
given2seqEstimateTheDistanceK2P.out.tmp
given2seqTheDistBetweenThem-3
given2seqTheDistBetweenThem-3.out.tmp
optimizeBranchesJC_EM
optimizeBranchesJC_EM.out.tmp
optimizeBranchesJC_EM_gam_estimate_alp
optimizeBranchesJC_EM_gam_estimate_alp.out.tmp
optimizeBranchesJC_EM_gamma
optimizeBranchesJC_EM_gamma.out.tmp
optimize_HKY_param
optimize_HKY_param.out.tmp
readTreeWithComments
readTreeWithComments.debug
readTreeWithComments.out.tmp
splitMap_test
splitMap_test.debug
splitMap_test.out.tmp
split_test
split_test.debug
split_test.out.tmp