" " " 23.18 " " 26.95 13.24 " " 17.67 1.90 794.38 " " 59.93 103.33 58.94 1.90 " " 1.90 220.99 173.56 55.28 75.24 " " 9.77 1.90 63.05 583.55 1.90 313.56 " " 120.71 23.03 53.30 56.77 30.71 6.75 28.28 " " 13.90 165.23 496.13 113.99 141.49 582.40 49.12 1.90 " " 96.49 1.90 27.10 4.34 62.73 8.34 3.31 5.98 12.26 " " 25.46 15.58 15.16 1.90 25.65 39.70 1.90 2.41 11.49 329.09 " " 8.36 141.40 608.70 2.31 1.90 465.58 313.86 22.73 127.67 19.57 14.88 " " 141.88 1.90 65.41 1.90 6.18 47.37 1.90 1.90 11.97 517.98 537.53 91.37 " " 6.37 4.69 15.20 4.98 70.80 19.11 2.67 1.90 48.16 84.67 216.06 6.44 90.82 " " 54.31 23.64 73.31 13.43 31.26 137.29 12.83 1.90 60.97 20.63 40.10 50.10 18.84 17.31 " " 387.86 6.04 494.39 69.02 277.05 54.11 54.71 125.93 77.46 47.70 73.61 105.79 111.16 64.29 169.90 " " 480.72 2.08 238.46 28.01 179.97 94.93 14.82 11.17 44.78 368.43 126.40 136.33 528.17 33.85 128.22 597.21 " " 1.90 21.95 10.68 19.86 33.60 1.90 1.90 10.92 7.08 1.90 32.44 24.00 21.71 7.84 4.21 38.58 9.99 " " 6.48 1.90 191.36 21.21 254.77 38.82 13.12 3.21 670.14 25.01 44.15 51.17 39.96 465.58 16.21 64.92 38.73 26.25 " " 195.06 7.64 1.90 1.90 1.90 19.00 21.14 2.53 1.90 1222.94 91.67 1.90 387.54 6.35 8.23 1.90 204.54 5.37 1.90 " " 0.072 0.019 0.039 0.019 0.006 0.025 0.024 0.056 0.028 0.088 0.169 " " 0.023 0.054 0.061 0.054 0.072 0.086 0.029 0.033 0.043 " " Ala Arg Asn Asp Cys Gln Glu Gly His Ile Leu Lys Met Phe Pro Ser Thr Trp Tyr Val " " S_ij = S_ji and PI_i for the mtREV24 model (Adachi and Hasegawa 1996). " " The PI's used to sum to 0.999 and I changed one of the freq from 0.168 " " into 0.169 so that the sum is 1. Prepared by Z. Yang according to " " data sent by Dr M. Hasegawa. This matrix was obtained from the 12 " " mitochondrial proteins encoded by the same strand of the DNA from a " " diverse range of species including bird, fish, frog, lamprey, as well " " as mammals (see Adachi and Hasegawa 1996 for details). The other " " matrix (mtmam.dat) included in the package is based on the same " " proteins from mammals only. " " Adachi, J. and Hasegawa, M. (1996) MOLPHY version 2.3: programs for " " molecular phylogenetics based on maximum likelihood. Computer Science " " Monographs of Institute of Statistical Mathematics 28:1-150. "