mirror of
http://43.156.76.180:8026/YuuMJ/EukPhylo.git
synced 2025-12-28 07:20:25 +08:00
33 lines
1.3 KiB
C++
33 lines
1.3 KiB
C++
// $Id: trivialAccelerator.h 1925 2007-04-04 16:40:22Z privmane $
|
|
|
|
#ifndef ___TRIVIAL_ACCELERATOR
|
|
#define ___TRIVIAL_ACCELERATOR
|
|
|
|
#include "pijAccelerator.h"
|
|
#include "replacementModel.h"
|
|
|
|
class trivialAccelerator : public pijAccelerator {
|
|
public:
|
|
|
|
explicit trivialAccelerator(const replacementModel* pb): _pb(pb->clone()) {};
|
|
trivialAccelerator(const trivialAccelerator& other):_pb(NULL){if (other._pb != NULL) _pb = other._pb->clone();}
|
|
const MDOUBLE Pij_t(const int i,const int j, const MDOUBLE d) const {return _pb->Pij_t(i,j,d);}
|
|
const MDOUBLE dPij_dt(const int i,const int j, const MDOUBLE d) const{return _pb->dPij_dt(i,j,d);};
|
|
const MDOUBLE d2Pij_dt2(const int i,const int j, const MDOUBLE d) const{return _pb->d2Pij_dt2(i,j,d);};
|
|
const MDOUBLE freq(const int i) const{return _pb->freq(i);}
|
|
virtual pijAccelerator* clone() const { return new trivialAccelerator(*this);}
|
|
virtual ~trivialAccelerator() {delete _pb;}
|
|
virtual const int alphabetSize() const {return _pb->alphabetSize();}
|
|
virtual replacementModel* getReplacementModel() const {return (_pb);}
|
|
|
|
private:
|
|
replacementModel* _pb;
|
|
};
|
|
|
|
#endif
|
|
|
|
// There is no distribution in the trivial accelerator. Actually, it's just an interface
|
|
// to the replacement Model and it doesn't accelerate anything.
|
|
// Every method retruns exactly the replacementModel corresponding method result.
|
|
|