Auden Cote-L'Heureux 1ee6f5ceb6

Small changes, see description ...

- Default partial filter cov threshold is 20%
- Changed script names
- Made requirement of conspecific names file explicit when using XPC

2023-10-02 11:49:03 -04:00

..

__pycache__

Add files via upload

2023-06-12 13:31:51 -04:00

1a_TranscriptLengthFilter.py

Updates to script 6 filters & script names

2023-09-29 13:20:49 -04:00

1b_CrossPlateContamination.py

Updates to script 6 filters & script names

2023-09-29 13:20:49 -04:00

2a_Identify_rRNA.py

Updates to script 6 filters & script names

2023-09-29 13:20:49 -04:00

2b_Identify_Proks.py

Updates to script 6 filters & script names

2023-09-29 13:20:49 -04:00

3_AssignOGs.py

Updates to script 6 filters & script names

2023-09-29 13:20:49 -04:00

4_InFrameStopCodonEstimator.py

Rename 4_InFrameStopCodonEsimator.py to 4_InFrameStopCodonEstimator.py

2023-10-02 11:11:49 -04:00

5_GCodeTranslate.py

Updates to script 6 filters & script names

2023-09-29 13:20:49 -04:00

6_FilterPartials.py

Small changes, see description

2023-10-02 11:49:03 -04:00

7_FinalizeName.py

Updates to script 6 filters & script names

2023-09-29 13:20:49 -04:00

7a_FinalizeName.py

Small changes, see description

2023-10-02 11:49:03 -04:00

7b_SummaryStats.py

Small changes, see description

2023-10-02 11:49:03 -04:00

8_SummaryStats.py

Small fix to 8_SummaryStats.py

2023-08-21 13:25:04 -04:00

CUB.py

Fixing 4-fold family error in CUB.py

2023-08-21 12:47:14 -04:00

wrapper_submit.sh

Add files via upload

2023-06-12 13:31:51 -04:00

wrapper.py

Small changes, see description

2023-10-02 11:49:03 -04:00