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34 lines
1.1 KiB
C++
34 lines
1.1 KiB
C++
// $Id: geneticCodeHolder.h 962 2006-11-07 15:13:34Z privmane $
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#ifndef ___GENMATRIXHOLDER
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#define ___GENMATRIXHOLDER
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#include <string>
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using namespace std;
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// THIS CONSTRUCT IS USED TO KEEP A STRING THAT IS THE AA SUBSTITUTION MATRIX
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// THE datMatrixString IS TO BE USED WHENEVER WE USE ONE OF THE BUILD-IN AA SUBSTITUTION MATRICES.
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class geneticCodeString {
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public:
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const string Val;
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explicit geneticCodeString(const char * str): Val(str){};
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};
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class geneticCodeHolder {
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public:
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static const geneticCodeString nuclearStandard;
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static const geneticCodeString nuclearEuplotid;
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static const geneticCodeString nuclearCiliate;
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static const geneticCodeString nuclearBlepharisma;
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static const geneticCodeString mitochondriaYeast;
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static const geneticCodeString mitochondriaVertebrate;
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static const geneticCodeString mitochondriaProtozoan;
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static const geneticCodeString mitochondriaInvertebrate;
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static const geneticCodeString mitochondriaFlatworm;
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static const geneticCodeString mitochondriaEchinoderm;
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static const geneticCodeString mitochondriaAscidian;
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};
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#endif // ___GENMATRIXHOLDER
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