EukPhylo/PTL2/Scripts-GRID/guidance.v2.02/libs/phylogeny/granthamChemicalDistances.h
Katzlab dd76ab1d12 Added PTL2 Scripts
These are PTL2 files from Auden 2/9
2023-02-14 11:20:52 -05:00

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852 B
C++

// $Id: granthamChemicalDistances.h 962 2006-11-07 15:13:34Z privmane $
#ifndef ___GRANTHAM_CHEMICAL_DISTANCES
#define ___GRANTHAM_CHEMICAL_DISTANCES
#include "definitions.h"
class granthamChemicalDistances {
public:
explicit granthamChemicalDistances();
MDOUBLE getGranthamDistance(const int aa1,const int aa2) const ;
MDOUBLE getGranthamPolarityDistance(const int aa1,const int aa2) const;
MDOUBLE getGranthamPolarity(const int aa1) const;
virtual ~granthamChemicalDistances() {}
MDOUBLE getHughesChargeDistance(const int aa1,const int aa2) const;// page 520
MDOUBLE getHughesPolarityDistance(const int aa1,const int aa2) const;// page 520
MDOUBLE getHughesHydrophobicityDistance(const int aa1,const int aa2) const;// page 520
private:
// private members:
MDOUBLE GranChemDist[20][20];
MDOUBLE GranPolarityTable[20];
};
#endif