Katzlab dd76ab1d12 Added PTL2 Scripts
These are PTL2 files from Auden 2/9
2023-02-14 11:20:52 -05:00

54 lines
1.5 KiB
Plaintext

creating a bootstrap object from a file
first constractor
5 size =2 0 1 | 2 3 4 5
1 size =3 0 1 2 | 3 4 5
1 size =2 0 1 2 3 | 4 5
2 size =2 0 1 2 5 | 3 4
1 size =2 0 1 3 5 | 2 4
1 size =2 0 1 4 5 | 2 3
4 size =3 0 1 5 | 2 3 4
secound constractor
5 size =2 0 1 | 2 3 4 5
1 size =3 0 1 2 | 3 4 5
1 size =2 0 1 2 3 | 4 5
2 size =2 0 1 2 5 | 3 4
1 size =2 0 1 3 5 | 2 4
1 size =2 0 1 4 5 | 2 3
4 size =3 0 1 5 | 2 3 4
getting weights from a tree
0 1 0 0 0.8 0 0.4 0 0 0
print the support of a tree
((Baboon:1e-06,Human:1e-06):1e-06[1],(Rat:1e-06,(Langur:1e-06,Cow:1e-06):1e-06[0.4]):1e-06[0.8],Horse:1e-06);
remove the first tree from the list, and use is as bases for additional computation
use the secound tree twice
{Baboon = 0}
{Cow = 4}
{Horse = 5}
{Human = 1}
{Langur = 2}
{Rat = 3}
5 size =2 0 1 | 2 3 4 5
1 size =2 0 1 2 3 | 4 5
1 size =2 0 1 2 5 | 3 4
1 size =3 0 1 3 | 2 4 5
1 size =2 0 1 3 5 | 2 4
2 size =2 0 1 4 5 | 2 3
4 size =3 0 1 5 | 2 3 4
print the support of the removed tree
((Baboon:1e-06,Human:1e-06):1e-06[1],(Rat:1e-06,(Langur:1e-06,Cow:1e-06):1e-06[0.2]):1e-06[0.8],Horse:1e-06);
compatability
(Cow:0.3,Langur:0.3,Rat:0.3,(Horse:0.3,(Baboon:0.3,Human:0.3):1e-06[1]):1e-06[0.8]);
compatability 0.0
(Langur:0.3,Rat:0.3,(Cow:0.3,(Horse:0.3,(Baboon:0.3,Human:0.3):1e-06[1]):1e-06[0.8]):1e-06[0.4]);
compatability 0.8
(Cow:0.3,Langur:0.3,Rat:0.3,(Horse:0.3,(Baboon:0.3,Human:0.3):1e-06[1]):1e-06[0.8]);