EukPhylo/PTL2/Scripts-GRID/guidance.v2.02/libs/phylogeny/tests/optimizeBranchesJC_EM.out.standard
Katzlab dd76ab1d12 Added PTL2 Scripts
These are PTL2 files from Auden 2/9
2023-02-14 11:20:52 -05:00

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This program computes for the JC model, the likelihood of a given tree (when the branch lengths are given).
computing the log likelihood of the tree...
starting L = -2228.09
end L, after bbl = -2219.50591327
(Aal:0.055486320897,(Ese:0.060836383576,(Ttt:0.018202550909,Mtr:0.048144922650):0.062910979704):0.037581468483,(Eco:0.092932108224,(Dvi:0.108160657949,Meu:0.042026386196):0.089296640074):0.033019500657);