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35 lines
1.0 KiB
Plaintext
35 lines
1.0 KiB
Plaintext
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args<-commandArgs();
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if(length(args)!=8) {
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cat("USAGE: R --slave --args raw_data out_fig fig_width < Guidance_Plot.R\n");
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q();
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}
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raw_data <- args[4];
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out_fig <- args[5];
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x_width <- as.integer(args[6]);
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x_width_thick <- as.integer(args[7]);
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Program <-args[8];
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#Note that the args vector contains everything you wrote in the commandline. In this case:
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#args[1]: /usr/lib64/R/bin/exec/R
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#args[2]: --slave
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#args[3]: --args
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#args[4]: raw_data
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#args[5]: out_fig
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#args[5]: fig_width
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#fig_width=13.15*x_width;
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#fig_width=14.5*x_width;
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#fig_width=14.916*cols-26*gaps;
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#par(mar=c(0, 0, 0.2, 0.2))
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fig_width=14.5*x_width;
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x_thick_num=x_width_thick/10;
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print (raw_data);
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print (out_fig);
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print (fig_width);
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guidance_col <- read.csv(file=raw_data,head=TRUE,sep=",");
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png(out_fig, width=fig_width,height=500,res = 76);
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plot ( guidance_col[,1], guidance_col[,2],type="b",col = "blue",ylab=paste(Program," Score"),xlab="Column",ylim=c(0,1),xlim=c(0,x_width_thick),xaxp=c(0,x_width_thick,x_thick_num),yaxp=c(0,1,10),xaxs="i",lty=3);
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dev.off()
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