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7 lines
443 B
Plaintext
7 lines
443 B
Plaintext
### Download and make your own ReadyToGo_AA_GC3_labelled folder with ReadyToGo files
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### Update the taxa list with the taxa files in your ReadyToGo folder
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### Download the Script folder
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### than run :
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python3 Scripts/phylotol.py --start raw --end trees --gf_list list_ogs.txt --taxon_list taxa_list.txt --data ReadyToGo_AA_GC3_labelled --output Output --similarity_filter --sim_cutoff 0.95 --og_identifier OG6 --tree_method iqtree > log1.out
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