Katzlab 3fe4ee3ae5

Update CUB.py ...

Updates to notes only, including clarifying that we use GC3 and GC3S interchangeably .. though GC3S probably most correct

2025-06-12 04:25:47 -04:00

..

BacktranslateAlignment.py

Adding allowance to backtranslating script for nucleotide sequences shorter than amino acid sequences by 3' trimming

2023-08-10 10:40:19 -04:00

CladeSizes.py

Update CladeSizes.py

2024-06-03 15:56:57 -04:00

Cluster.py

Add files via upload

2025-04-06 23:36:01 -04:00

CUB.py

Update CUB.py

2025-06-12 04:25:47 -04:00

GC_identifier.py

Update GC_identifier.py

2024-06-03 15:57:12 -04:00

GuidanceWrapper.py

Update and rename GuidanceWrapper_v2.1.py to GuidanceWrapper.py

2024-06-03 15:56:23 -04:00

Plotcomps_SppName.R

Rename Plotcomps_SppName_v1.0.R to Plotcomps_SppName.R

2024-06-03 15:57:57 -04:00

PlotComps.r

Rename PlotComps_v2.0.r to PlotComps.r

2024-06-03 15:57:38 -04:00

Salmon.sh

Adding TPM calculating script (Salmon)

2025-01-09 12:06:10 -05:00

SeqLenToCsv.py

Update and rename SeqLenToCsv_v1.0.py to SeqLenToCsv.py

2024-06-03 15:59:04 -04:00

SharedOGs.py

Update and rename SharedOGs_v1.0.py to SharedOGs.py

2024-06-03 15:59:27 -04:00