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EukPhylo/PTL2/Scripts-GRID/trimal-trimAl/dataset/example.045.AA.bctoNOG.ENOG4109AGT.fasta
Katzlab dd76ab1d12 Added PTL2 Scripts 
These are PTL2 files from Auden 2/9
2023-02-14 11:20:52 -05:00

493 lines
22 KiB
Plaintext
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>518766.Rmar_0742
------------------MKDIIRGLAYV----VGDSIDTDQIIPAQHLV
YSLTRPEERRL--YGRYALSGVPAEG-QGLPFGNIPFTEPDAYKSRFKIV
VAGKNFGCGSSREHAPFALQEAGCEAVVAESYARIFYRNAIDGGFVVPFE
TPVRLIDKI------RTGDELEIDTRLAKLT--NLTT----GEE----FL
LHP---------L-GEVAEIL-RAGNLFEYA-R-KAGLIPTNA----
>309807.SRU_2152
MPTA--------------TDNTVTTVTGPAVSVRGNDIDTDQIVPARFLK
-----EVTFDN--MGEYAFYDVRRDD-DGSLN-DHPFN---RYPNA-TIL
VVNENFGCGSSREHAPQALMRWGIDGLIGESFAEIFAGNCQALGL-PTAT
ADHETVEWIMAQVTADPALELTIDVEAETVT--VSD------EP--VDVT
ISDAQREALLQGVWDTTALMKSYMDEVEQTA-D-RLPYLNEFADC--
>595499.SMDSEM_045
-------------------MEKFITLISRAVPIYLENIDTDQIIPARFLK
LTKK-----IN--FGKNLFKDWRFDQ-KGNLIKNFILNHEK-FY-GE-IL
ITGKNFGCGSSREHAAWAIRDYGFKVVISNYFADIFKQNALNNGL-LIIE
LKNTFLKFILKKILLNPNLFIEINLEHQYVK--IEK------KK--EFFK
IDDFIKKCFINGY-DEIEYILNLKKKFKNFE--KKIYYY--------
>641892.DMIN_00390
-------------------MEKFITLFSTAVPLFIDNIDTDQIIPARFLK
LTTK-----SD--FGKNLFRDWRYDS-NGKIKKNFILNKKK-YS-GN-IL
ITGKNFGCGSSREHAAWAIRDYGFKVVISNIFADIFKQNALNNGL-LTIE
LKKDFINLIYKKIFLNPNILFEINLEQQYVK--FEN------NK--ELFK
IDDFKKKCFINGY-DDIELLFSIKKKIEIFE--KKNIYN--------
>706194.SMCARI_049
-------------------MEKFITLFSTAVPLDIENIDTDQIIPARFLK
LTTK-----SD--FGKNLFRDWRYNS-NGKINKNFILNNKN-YS-GK-IL
ITGKNFGCGSSREHAAWAIKDYGFKVVISNFFADIFKQNALNNGL-LTIE
LKKTFLNLILKKLYLNNNLIFSINIENQYVK--IEN------NK--EYFQ
IDDYKKKCFINGY-DDIEFLLSLKKKIKDFE--KKNLYN--------
>331104.BLBBGE_069
-------------------M-----LISQAIPLPIEDIDTDQIIPARFLK
EIKR-----EE--CGKNLFIDWRYKK-DGSLNKDFVFNNSN-FF-GK-IL
LSGRNFGCGSSREHAAWSLYDYGFRVIISSFFADIFRENALNNGL-LTVE
VSKCFLNKLFDIINKNPRTQIKVDLINQKVT--IMET----GEF--YQFY
IHPYKKNCFLNGY-DDIDFLVSIKKDVEYFE--KNRKSVPF------
>600809.BPLAN_565
-------------------MKKFTVITSKAVPLPVEDIDTDQIIPARFLK
EAKR-----EE--YGKNLFRDWRYSN-DGSLKKDFILNNPL-FS-GK-IL
LSGRNFGCGSSREHAAWALFDYGFQVVISSFFADIFKENALNNGL-LTVE
ISEKFLKNLFDLVNKKPDTNIKVDLIEQLIT--IMET----GIS--EKFY
IHPYKKNCFINGY-DDIDFLVSIKKDIENFE--KKTNSFKI------
>643867.Ftrac_1643
-M------------------EKFNTLNSQAVLLPFEDVDTDQIIPARFLK
SVSR-----EG--FGENLFRDWRYLE-DGSPNPEFVLNQEG-NK-GD-VL
VAGRNFGCGSSREHAAWALVDYGFKAVVSSFFADIFKNNALNNGL-LPVQ
VTDDFLAQVFQILKNRPEAKLQIDLNEQEIS--LVGS----ALT--ESFE
INSYKKYCLQNGF-DDIDFLLNKRAEIEAYE-Q-SLA----------
>525257.HMPREF0204_13895
-M------------------QKLIIIKSTAVPLPAENIDTDQIIPARFLK
SIDR-----KG--FGENLFRDWRFNIHTGEPNPDFVLNNPK-FS-GE-IL
VAGNNFGCGSSREHAAWALTDYGFKVIISSYFADIFKGNALNNGL-LPVK
VSEGFLKEILEGINENPDQEIAIDVELQSVS--FKD------VT--ETFE
LDSYKKICLLNGY-DDIDFLISRKKAITEFELK-TQKTNERQLF---
>391587.KAOT1_15177
-M------------------STFNTFTSTAFPLAVENIDTDQIIPARFLK
ATSR-----DG--FGENLFRDWRYHK-DGSLNADFVLNQQQ-YS-GS-IL
VAGHNFGCGSSREHAAWALKDFGFNVIISSFFADIFKGNALNNHV-LPIQ
VTPAFLAKLLVAIQENPNTEIEVNLEAQTVA--FG-------KE-KASFD
INPYKKMCLQKGY-DDIDFLVSNLSKIKAFE-Q-QHIY---------
>313606.M23134_05908
-MLLEANCLLLFLNQKIMKDSSFGLLQTTGVPVKVENVDTDQIIPARFLK
AISR-----EG--FGENLFYDWRYDN-EGNPKPDFILNQPG-ND-GQ-VL
VGGKNFGCGSSREHAAWAIKDYGFKAVISSFFADIFKGNALNNGV-LPVQ
VSDAFLARLFDLMEQDATTPIAIDLEAQTVAVTNKQT----GETMTEIFE
INEYKKMCLQKGY-DDIDYLLSLQTQVETYE-K-NKAVY--------
>908612.HMPREF9720_0162
-M----------------SIPKFETFTSGAVPVRTENIDTDQIIPARFLK
ATER-----KG--FGDNLFRDWRYDA-EGRKVASFPLNDSR-YE-GR-IL
VAGRNFGCGSSREHAAWAIADYGFRVVVSSFFADIFRNNALNNGL-LPIT
VSDNFLAAIFAAIADDPAARFTVDLEGQTLT--AEAT----GRS--ERFE
IDAYKKRCLQNGY-DDVDYLCSISDQIRRFE-A-ARK----------
>717959.AL1_28200
-M----------------SIPKFVTFTSGAVPVEVENIDTDQIIPARFLK
ATER-----KG--FGDNLFRDWRYDA-AGQRIASFPLNDPR-YE-GR-IL
VAGRNFGCGSSREHAAWAIADYGFRVVVSSFFADIFRNNALNNGL-LPIR
VSEEFLKAVFGEIRRDPKAQFTVDLGNQTLT--IVSD----GRS--EGFE
IDAYKKRCLENGY-DDVDYLRSIADRIEAFE-A-ARK----------
>709991.Odosp_2902
-M-----------------INQFTTLTSTAIPLKIENVDTDQIIPARFLK
ATTR-----EG--FGKQLFFDWRYDA-QGNPKTDFVLNSPD-YT-GE-IL
IAGKNFGCGSSREHAAWAIYGAGFKVVISSFFADIFRNNALNNGL-LPVQ
VSESFLAKLFQVVRSAPSTTVSIDLERQTVT--LTAT----GEQ--ELFE
ISPYKKECLLKGY-DDVDYLMSIHHKIEAFE-K-TR-----------
>760192.Halhy_2014
-M----------------AREKFHLVHSSAVPVHIENVDTDQIIPARFLK
ATTR-----DG--FGENLFRDWRYDS-NNQPIADFVLNNPR-YS-GD-IL
VSGKNFGCGSSREHAAWAITDYGFKVVVSSFFADIFKNNALNNGL-LPVQ
VSDEFLAHIFSAIELDHQTTFTVNLETQTFT--IDAT----GAS--FNFE
INSYKKECMLNGY-DDIDYLLNMKDKIAKFE-Q-SRA----------
>485918.Cpin_1984
------------------MSKTFQHLVSTAVPIAIENIDTDQIIPARFLK
ATTR-----DG--FGENLFRDWRFDT-NNEPKQDFILNNPI-YK-GQ-IL
VAGKNFGCGSSREHAAWAIGDYGFKVVISSFFADIFKNNALNNFI-LPIT
VTDEFLDKIFKAIETDPAAQLEIDLEKQSLK--IVAT----GEE--ISFD
INPYKKACLINGY-DDIDYLLSLRKEIESYE-A-SREFNF-------
>269798.CHU_3743
-M------------------EKFITIKSTVVPLPIEDVDTDQIIPARFLK
ATTK-----EG--FGKSLFCDWRYNQ-DGTPKADFVMNNPL-YS-GQ-IL
VAGKNFGCGSSREHAAWAIGDAGFRVVVSSFFADIFRGNALNNGI-LPVQ
VSDAFLKSIFDAVAANAKQELVVDLANQVIS--IAGT----DLK--ESFV
INEYKKTCLINGY-DDIDYVLSIKDKIEAYE-K-TSKYLSLLA----
>525373.HMPREF0766_11214
-M------------------KKFEKLNSTVVPLPIENIDTDQIIPARFLK
ATTR-----EG--FGNNLFRDWRFDS-NNQPKADFVMNNPT-YK-GK-IL
VAGKNFGCGSSREHAAWAIQDYGFDVVISSFFADIFKGNALNNGV-LPIQ
VSDEFLETIFETVTKNPDTEVIVDLENQTVT--LVEN----GAQ--TSFE
INPYKKSCLINGY-DDIDFILNQKELIEKYE-L-SK-----------
>391596.PBAL39_23282
-M------------------RKFEKLTSAIVPLNIENIDTDQIIPARFLK
ATTR-----EG--FGENLFRDWRYNG-DNTPKADFVLNNPT-YS-GK-VL
VAGKNFGCGSSREHAAWAIQDAGFDVVISSFFADIFKGNALNNGL-LPIQ
VSEDFLAAIFAAVDKSHTAQLEVDLEQQTVT--IADT----GEQ--SSFE
INPYKKSCLINGY-DDIDFILNQKDLIEAFE-K-AR-----------
>388413.ALPR1_04843
---M--------------AYDKFTVLKSRAVPLPSENVDTDQIIPARFLK
ATER-----EG--FGDNLFRDWRYDV-EGNPKKDFVLNDPT-YT-G-KIL
VAGKNFGSGSSREHAVWAIYDYGFRCVVSSFFADIFKNNCLNIGV-LPVT
VTPEFADKLLNAITEDPSTEIEVSIPAQTIT--LLST----GES--ESFD
INSYKKDNMQNGF-DDIDYLLSMESEIDQFE-K-TR-----------
>880070.Cycma_2381
---M--------------AYDKFDVLTSRVVPLSSENVDTDQIIPARFLK
ATER-----KG--FGDNLFRDWRYDK-EGNPKPDFVLNDPT-YS-G-KIL
LAGKNFGSGSSREHAVWAIYDYGFRCVVSSFFADIFKNNCLNIGV-LPVT
VSPKFAEELFAAVEANPEAEVEVDINKQTIT--LLST----GNS--ESFD
INSYKKQNMKNGF-DDIDYLLNLKEEIVAFE-A-KR-----------
>313598.MED152_03685
---M--------------AYDKFNVLTSTAYPLPIENVDTDQIIPARFLK
ATER-----VG--FGDNFFRDWRYNQ-DGSPKADFPLNKEI-YA-GSKIL
VGGKNFGSGSSREHAAWSVYDFGLRCVISSFFADIFRNNCLNVGV-LPVQ
VTGVFADKLFDAIMADPKTEIKVDLPNQTVT--LVAT----GES--EPFE
INTYKKDNMLNGF-DDIDYLKNIEDEIAAFA-A-TRPF---------
>313594.PI23P_10660
---M--------------AYDKFQVLTSTAYPLPTENVDTDQIIPARFLK
ATER-----VD--FDVNFFRDWRYNQ-DGTPKADFPLNKEI-YA-GSKIL
VGGRNFGSGSSREHAAWSVYDFGLRCVISSAFADIFKNNCLNVGV-LPVQ
VSAAFADTLFAAIMADPKTVITVDLPNQKVT--LVAT----GAS--ESFV
INTYKKDNMLNGF-DDIDYLKNIENEITAFA-K-TRPF---------
>487796.Flav2ADRAFT_0140
---M--------------AYDSFSILTSTAVPLPIENVDTDQIIPARFLK
ATER-----VG--FGDNLFRDWRYNQ-DDSPKADFVLNDAT-YQ-G-KIL
VGGHNFGSGSSREHAAWAVYDYGFRCVVSSFFADIFRNNCLNIGV-LPVQ
VSTEFLAEIFEAIQDDPSTQLTVDLHKQSIV--LSSN----GKS--EFFD
INDYKKDNMLNGY-DDIDYLSNIKSEIEGFA-L-NTPL---------
>688270.Celal_3692
---M--------------AYDKFEILTSTAVPLAIENVDTDQIIPARFLK
ATER-----KG--FGDNLFRDWRYNT-DDSPKADFVLNDST-YS-G-KIL
VGGRNFGSGSSREHAAWAVYDYGFRCVISSFFADIFKGNCLNIGV-LPVQ
VSADFSNTLFSEIEKDPNTQIEVNLQEQTVT--LLAT----GAK--ESFD
INGYKKDNMLNGF-DDIDYLMNVKTDIIEFA-K-HTPL---------
>487797.Flav3CDRAFT_0407
---M--------------AYDKFTTLTTTAVPLPIENVDTDQIIPARFLK
ATER-----VG--FGDNLFRDWRYNS-DNTPKEDFVLNNPK-YS-G-KIL
IGGKNFGSGSSREHAAWAVYDYGFRCVVSSFFADIFKNNCLNIGV-LPVQ
VSPAFLEVILEAVFKDPTTEVVVDLPSQTIR--IPST----GDQ--ESFD
INVYKKDNMLNGF-DDIDYLRSMEEEISSFA-D-NTPL---------
>700598.Niako_2681
---M--------------AYDKFTVLKSTAVPMPIENVDTDQIIPARFLK
ATER-----KG--FGDNLFRDWRFEN-DGTPKKDFVLNNPI-YT-G-KIL
VGGKNFGSGSSREHAAWAIYDYGFRCVVSSFFADIFKNNSLNIGI-LPVQ
VSEAFLDKIFKAIEANPKTELEVNLPEQKIT--IVGD----GAS--ELFE
INGYKKHNMTNGF-DDIDFLQSLKSDIKTFS-E-KSIY---------
>886377.Murru_3244
---M--------------AYDKFNILTSSAVPLPIENVDTDQIIPARFLK
ATER-----KG--FGDNLFRDWRYNS-DGTPKEQFVLNNPI-YS-G-KIL
VGGKNFGSGSSREHAAWAVYDYGFRCVVSSFFADIFRGNCLNIGV-LPVQ
VTPEFLDKIYKAIEADPKTELEINLPEQKIT--ILAT----GES--ESFD
INDYKKDNMLNGF-DDIDYLLNIQDDIEKYA-E-NTPL---------
>313603.FB2170_12251
---M--------------AYDKFNILTSSAVPLPIENVDTDQIIPARFLK
ATER-----KG--FGDNLFRDWRYNG-DDTPKKDFVLNNPI-YS-G-KIL
VGGKNFGSGSSREHAAWAVYDYGFRCVVSSFFADIFRNNCLNIGV-LPVQ
VSADFLHKIFTAIEADPEAQLEVNLKDQSVT--ILAT----GEK--ESFD
INDYKKANMTNGF-DDIDYLLNIKGKISEYA-Q-DTPL---------
>313596.RB2501_14449
---M--------------AYDKFTILRSTAVPLPIENVDTDQIIPARFLK
ATER-----KG--FGDNLFRDWRYHP-DNTPKEHFVLNNPI-YS-G-KIL
VGGKNFGSGSSREHAAWAVYDYGFRCVVSSFFADIFRNNCLNVGV-LPVQ
VSAEFLQRIFEAIEKDPKAELEVNLQEQTIT--LLPT----GDS--ESFE
INGYKKENMLNGF-DDIDYLLNMKEEIKSFA-G-DTPL---------
>867900.Celly_2758
---M--------------AYDKFNILKSSVVPLPIENVDTDQIIPARFLK
ATER-----KG--FGDNLFRDWRYNA-DNSPKKDFVLNQDK-YS-G-KIL
VGGKNFGSGSSREHAAWAVYDYGFRCVVSSFFADIFRNNCLNVGV-LPVQ
VSPEFLEKIFAETEKDADSQVEVNLQEQTIT--IVNI----GDK--ESFD
INAYKKENMLNGF-DDIDYLLNMKEEITAFA-E-NTPL---------
>649349.Lbys_2679
---M--------------AYDSFNILTSSCVPLPLENVDTDQIIPARFLK
ATKR-----EG--FGDNLFRDWRYHS-DGTPKEDFVLNNPT-YS-G-KIL
VAGRNFGSGSSREHAAWAIYDYGFRCVISSFFADIFKGNSLNIGI-LPVT
VSPEFLDKIFRAIESDPSTEVEVNLPEQKVT--LLVT----GES--ESFQ
INGYKKNNLLNGY-DDIDYLLSLKSEISEFE-K-TRI----------
>761193.Runsl_0745
---M--------------AYDQFTILKSSAVPLPLENVDTDQIIPARFLK
ATKR-----EG--FGDNLFRDWRYNP-DNSPKADFVLNNPL-YS-G-KIL
VGGRNFGSGSSREHAAWAIYDYGFRCVVSSFFADIFKNNSINVGI-LPVT
VSPEFLDKIFQAIEKDPKTELEVSLPEQTIT--ILAT----GDQ--ESFD
INGYKKHNLLNGF-DDIDYLRAMKEEIGAFE-A-ALLF---------
>471854.Dfer_3673
---M--------------AYDKFTILKSSAVPLPIENVDTDQIIPARFLK
ATKR-----EG--FGDNLFRDWRFNG-DDTPKQDFVLNNPI-YS-G-KIL
VGGHNFGSGSSREHAAWAIYDYGFRCVVSSFFADIFKGNSLNIGI-LPVQ
VSPEFLNKIFEAIEADPNAELEVNLPDQKIT--ILAT----GES--ESFD
INGYKKHNLTNGF-DDIDYLQAMKGEIKEFE-A-ERIF---------
>376686.Fjoh_1306
---M--------------AYDKFNILTSSAVPLPIENVDTDQIIPARFLK
ATKR-----EG--FGDNLFRDWRYNG-DDTPKADFVLNNPT-YS-G-KIL
VGGKNFGSGSSREHAAWAVYDYGFRAVVSSFFADIFKGNCLNIGV-LPVQ
ISPEFLANIFEAIEADPNTELEINLPNQTIT--LLST----GEQ--ESFA
INGYKKNNMINGF-DDIDYLQNMKEDIKAFA-D-KLPY---------
>504472.Slin_5901
---M--------------AYDKFTILRSTAVPMPIENVDTDQIIPARFLK
ATER-----KG--FGDNLFRDWRYNN-DNTPKADFVLNDPT-YS-G-KIL
VGGKNFGSGSSREHAAWAIYDYGFRCVVSSFFADIFQANSINVGI-LPVR
VSPEFLEKIFAAIEADPKTELEINLPAQTIT--LLAT----GES--ESFA
INEYKKHNLTNGY-DDIDYLLSMKEEIGAFA-E-TRPF---------
>762903.Pedsa_2357
---M--------------AYDKFNILTSTAVPLPIENVDTDQIIPARFLK
ATER-----VG--FGDNLFRDWRYNA-DDTPKADFVLNDPT-YK-G-KIL
VGGKNFGSGSSREHAAWAVYDYGFRCVVSSFFADIFKNNCLNIGV-LPVQ
ISPEFLEKIFAAIYDNPETELEINLPEQTIT--LLAT----GES--EKFD
INSYKKGNMLNGF-DDIDYLKSMTSEIEAFA-E-TRPF---------
>743722.Sph21_2281
---M--------------AYDKFNILTSTAVPLPIENVDTDQIIPARFLK
ATKR-----EG--FGDNLFRDWRYNS-DNTPKSDFVLNNPI-YG-G-KIL
VGGKNFGSGSSREHAAWAVYDYGFRCVVSSFFADIFKNNCLNIGV-LPVQ
VSPEFLEKIFSAVFADPKTELEVNLPEQTIT--LLPT----GEK--EKFD
ISPYKKDNLSNGF-DDIDYLQNIKGEIQDFA-S-TLPF---------
>714943.Mucpa_4478
---M--------------AYDKFNILTSTAVPLPIENVDTDQLIPARFLK
ATER-----VG--FGDNLFRDWRYNA-DNTPKADFVLNNPL-YG-G-KIL
VGGKNFGSGSSREHAAWAVYDYGFRCVVSSFFADIFRNNCLNVGV-LPVQ
VSTEFADKIFAAIHANPKTELEVNLPEQTIT--LLAT----GEK--ETFD
ISPYKKDNMINGF-DDIDYLQSIKAEIQEFA-A-HLPL---------
>485917.Phep_3426
---M--------------AYDKFNVLRSTAVPLPIENIDTDQLIPARFLK
ATER-----VG--FGDNLFRDWRYNP-DNTPKKDFVLNNPV-YS-G-KIL
VGGKNFGSGSSREHAAWAVYDYGFRCVISSFFADIFKNNCLNIGV-LPVQ
VSAEFADKIFTAIHADPNTELEVNLPEQTVT--LLAT----GEK--ETFE
ISPYKKDNMMNGF-DDIDYLQSIKPEIEEFA-L-HLPL---------
>679937.Bcop_1656
-MFASDALSIRSRTLTYPKMKQFKTVTSTYIPLPIENVDTDQIIPARFLK
ATTR-----EG--FGENLFADWRYDE-AGNPKQEFILNDST-YQ-G-EIL
VAGKNFGSGSSREHAAWAVADYGFRVVISSFFADIFQNNALNNGI-LPVV
VSPDFLNKLFRASKENPKHTLTVNLEKQTVC--LDSS----GCT--EVFA
INPYKKQCLLQGM-DDIDLLLLNQSKIETYE-K-VRPWSY-------
>511995.CFPG_591
-------------------MEKFVTLTSTVVPLPIQNIDTDQIIPARFLK
AISK-----EG--FGNNLFRDWRYDK-NNNAISSFVLNNPI-YNES-KIL
VTGKNFGSGSSREHAAWAIADYGFKVVISSFFADIFKNNAMNNFV-LPLV
VSETFLSQIFESVNKNPKTTLTIDLENQIIN--NNST----RQL--EKFI
INAYKKECFLNGF-DDIDFLLDKKYKIEEYE-R-NCEY---------
>688246.Premu_1557
------------------MKQKFNIITSTCVPLPLENVDTDQIIPARYLK
LTQK-----DG--FGPYLFHDWRFNA-DGSEKKDFVLNKPD-FK-DAVIL
VAGKNFGSGSSREHAAWAIAGYGFRVVISSFFADIHKNNELNNFV-LPVV
VTESFLKELFDSIAHNHQTQVRVDLPNQTVT--NLAT----GRS--EHFE
INGYKKHCLENGL-DDVDFLVQNRDKVEVWE-E-KHKR---------
>264731.PRU_0731
------------------MKQKFNVITSTCIPLPMENVDTDQIIPARFLK
ATTR-----EEKFFGDNLFRDWRYNA-DGTLNNDFVLNNPK-YS-G-CIL
VAGKNFGSGSSREHAAWAIAGYGFRVVISSFFADIHKNNELNNFV-LPVV
VSEAFLAELFASIDADAKTEVEVDLPNQTVT--NKAT----GRS--EHFD
INAYKKHCLMNGL-DDIDFLVENKQKTEQWE-Q-ANK----------
>762982.HMPREF9442_01679
------------------MKQKFNIITSTCVPLPLENVDTDQIIPARFLK
ATTR-----EESFFGENLFRDWRYNA-DGTVNKDFVLNNPT-YG-G-EIL
VAGKNFGSGSSREHAAWAIAGYGFRVVISSFFADIHKNNELNNFV-LPVV
VSEDFLAELFASIEADPKMQVEVDLPNQTVT--NKAT----GHS--EKFE
INGYKKYCLMNAL-DDIDFLLENKGKIEDWE-R-RNA----------
>706436.HMPREF9074_05495
------------------MKQKFNIITSTCVPLPLENVDTDQIIPARFLK
ATTR-----EESFFGENLFRDWRYNA-DGTVNKDFVLNNPT-YG-G-EIL
VAGKNFGSGSSREHAAWAIAGYGFRVVISSFFADIHKNNELNNFV-LPVV
VSEDFLAELFASIEADPKMQVEVDLPNQTVT--NKAT----GRS--EKFE
INGYKKYCLMNAL-DDIDFLLENKGKIEDWE-R-RNA----------
>411477.PARMER_03808
------------------MKQKFNIITSTCVPLPLENVDTDQIIPARFLK
ATDK-----KG--FGENLFRDWRYDK-QGNKIESFVLNDPT-YG-G-QIL
VAGKNFGSGSSREHAAWAIADYGFRVVVSSFFADIHKNNELNNFV-LPVV
VSEPFLAELFDSIFADPKTEVEVNLPAQTIT--NKAT----GKS--EHFD
INAYKKDCLVNGL-DDIDYLLSNKEKIEAFE-R-RR-----------
>435591.BDI_2062
------------------MKTKFNIITSTCVPLPLENVDTDQIIPARFLK
ATTK-----EG--FGENLFRDWRYDK-EGNKIESFVLNDPT-YS-G-KIL
VAGKNFGSGSSREHAAWAIADYGFRVVVSSFFADIHKNNELNNFV-LPVV
VTEEFLAELFDSIYKDPKTEVEVNLPEQTIT--NKAT----GKS--EHFE
INAYKKDCLINGL-DDIDYLLANKSKIEAFE-A-AR-----------
>226186.BT_1859
---M--------------AKTKFNIITSTCVPLPLENVDTDQIIPARFLK
ATTR-----EEKFFGDNLFRDWRYNA-DGSLNKDFVLNDPT-YS-G-QIL
VAGKNFGSGSSREHAAWAIAGYGFRVVVSSFFADIHKNNELNNFV-LPVV
VTEGFLQELFDSIFADPKMEVEVNLPEQTIT--NKAT----GKS--EHFE
INAYKKLCLMNGL-DDIDFLLSNKNKIEEWE-N-KASK---------
>411476.BACOVA_04602
---M--------------AKTKFNIITSTCVPLPLENVDTDQIIPARFLK
ATTR-----EEKFFGDNLFRDWRYNA-DGSLNKDFVLNNPT-YS-G-QIL
VAGKNFGSGSSREHAAWAIAGYGFRVVVSSFFADIHKNNELNNFV-LPVV
VTEEFLQELFGSIEADPKMEVEVNLPEQTIT--NKAT----GKS--EHFE
INAYKKLCLMNGL-DDIDFLLSNKDKIEEWE-K-KA-----------
>483215.BACFIN_05149
---M--------------AKTKFNIITSTCVPLPLENVDTDQIIPARFLK
ATTR-----EEKFFGDNLFRDWRYNA-DGSLNKDFVLNNPT-YS-G-QIL
VAGKNFGSGSSREHAAWAIAGYGFRVVVSSFFADIHKNNELNNFV-LPVV
VTEEFLQELFDSIEADPKMEVEVNLPEQTIT--NKAT----GKS--EHFE
INAYKKLCLMNGL-DDIDFLLSNKDKIEEWE-K-KA-----------
>484018.BACPLE_01592
-MSV--------------MKQKFNIITSTCIPLPLENVDTDQIIPARFLK
ATTR-----DEKFFGDNLFRDWRYHP-DGSLNKDFVLNNPK-YS-G-QIL
VAGKNFGSGSSREHAAWAIAGYGFRVVVSSFFADIHKNNELNNFV-LPVV
VSEEFLKELFASIEADPQMEVEVNLPAQTIT--NKAT----GKS--ETFE
INAYKKHCLMNGL-DDIDFLVENKDKIEAFE-K-ARN----------
>470145.BACCOP_03332
------------------MKQKFNIITSTCIPLPLENVDTDQIIPARFLK
ATTR-----DEKFFGDNLFRDWRYNP-DGSLNKDFVLNNPT-YS-G-QIL
VAGKNFGSGSSREHAAWAIAGYGFRVVVSSFFADIHKNNELNNFV-LPVV
VSEAFLKELFDSIYADPKTEVEVNLPEQTIT--NKAT----GKS--EKFE
INAYKKHCLMNGL-DDIDFLVENKDKIEAYE-K-ARN----------
>763034.HMPREF9446_00093
------------------MKQKFNIITSTCVPLPLENVDTDQIIPARFLK
ATTR-----EEKFFGDNLFRDWRYHP-DGSLNKDFVLNNPT-YG-G-QIL
VAGKNFGSGSSREHAAWAIAGYGFRVVVSSFFADIHKNNELNNFV-LPVV
VSEPFLKELFDSISADPKMEVEVDLPQQTIT--NKAT----GKS--EPFE
INAYKKHCLMNGL-DDIDFLVENKDKIETWE-K-KNEA---------
>435590.BVU_2006
------------------MKQKFNIITSTCVPLPLENVDTDQIIPARFLK
ATTR-----EEKFFGDNLFRDWRYNP-DGSLNKDFVLNNPT-YG-G-QIL
VAGKNFGSGSSREHAAWAIAGYGFRVVVSSFFADIHKNNELNNFV-LPVV
VSEGFLKELFDSIHADPKMEVEVNLPEQTIT--NKAT----GKS--EHFE
INAYKKHCLMNGL-DDIDFLLTNKDKIEAWE-K-ASK----------
>457424.BFAG_03562
------------------MKAKFNILTSTCVPLPLENVDTDQIIPARFLK
ATTK-----EG--FGENLFRDWRYDK-QGNKIESFVLNDPT-YG-G-QIL
VAGKNFGSGSSREHAAWAIADYGFRVVVSSFFADIHKNNELNNFV-LPVV
VTEEFLAELFDSIFKNPKMEVEVNLPEQTIT--NKAT----GKS--EHFE
INAYKKHCLMNGL-DDIDFLLTNKDKIEQWE-K-ASK----------
>272559.BF3265
------------------MKAKFNILTSTCVPLPLENVDTDQIIPARFLK
ATTK-----EG--FGENLFRDWRYDK-QGNKIDSFVLNDPT-YG-G-QIL
VAGKNFGSGSSREHAAWAIADYGFRVVVSSFFADIHKNNELNNFV-LPVV
VTEEFLAELFDSIFKNPKMEVEVNLPEQTIT--NKAT----GKS--EHFE
INAYKKHCLMNGL-DDIDFLLTNKDKIEQWE-K-ASK----------
>483216.BACEGG_01825
------------------MKQKFNIINSTCVPLPLENVDTDQIIPARFLK
ATTK-----EG--FGENLFRDWRYNA-DGSLNEEFVLNNPT-YG-G-QIL
VAGKNFGSGSSREHAAWAIAGYGFRVVVSSFFADIHKNNELNNFV-LPVV
VSEPFLKELFDSIFANPKTEVEVNLPEQTIT--NKAT----GKS--EHFE
INAYKKHCLMNGL-DDIDFLVGNKDKIEAWE-K-NNEA---------
>471870.BACINT_03231
------------------MKQKFNIITSTCVPLPLENVDTDQIIPARFLK
ATTK-----EG--FGENLFRDWRYDK-QGNKIDSFVLNDPT-YS-G-QVL
VAGKNFGSGSSREHAAWAIADYGFRVVVSSFFADIHKNNELNNFV-LPVV
VSEPFLKELFDSIAADPKTEVVVNLPEQTIT--NKAT----GKS--ETFE
INAYKKHCLMNGL-DDIDFLVENKDKIEAWE-N-KK-----------
>449673.BACSTE_01510
------------------MKQKFNIINSTCVPLPLENVDTDQIIPARFLK
ATTK-----ED--FGENLFRDWRYDK-QGNKIESFVLNDPT-YG-G-QIL
VAGKNFGSGSSREHAAWAIADYGFRVVVSSFFADIHKNNELNNFV-LPVV
VSEPFLKELFDSVFANPKTEVEVNLPEQTIT--NKAT----GKS--EHFE
INAYKKHCLMNGL-DDIDFLVENKDKIESWE-K-KHEA---------
>762984.HMPREF9445_01062
------------------MKQKFNIINSTCVPLPLENVDTDQIIPARFLK
ATTK-----EG--FGENLFRDWRYDK-QGNKIESFVLNDPT-YG-G-QIL
VAGKNFGSGSSREHAAWAIADYGFRVVVSSFFADIHKNNELNNFV-LPVV
VSEPFLKELFDSVFADPKTEVEVNLPEQTIT--NKAT----GKS--EHFE
INAYKKHCLMNGL-DDIDFLVENKDKIESWE-K-KHEA---------
>873533.HMPREF0663_12060
------------------MKQKFDIITSTCVPLPLENVDTDQIIPARFLK
ATDK-----EG--FGDNLFRDWRYNK-DGSLKEDFVLNDTS-YG-G-VIL
VAGKNFGSGSSREHAAWAIAGYGFRVVISSFFADIHKNNELNNFV-LPVV
VSEMFLRELFESIDKDHQTQVKVDLPNQTVT--NMAT----GSS--EHFE
INAYKKHCLMNGL-DDIDYLLQNKDKIEQWE-Q-QNK----------
>575611.HMPREF0649_02149
------------------MKQKFDIITSSCIPLPLENVDTDQIIPARFLK
ATDK-----EG--MGDNLFRDWRYNA-DGTPKKDFVMNDPS-YS-G-VIL
VAGKNFGSGSSREHAAWAIAGAGFRVVISSFFADIHKNNELNNFV-LPVV
VTEDFLKELFQSIEADHKTQVRVDLPNQIVT--NLAT----GRS--EQFE
INAYKKHCLMNGL-DDVDFLVQNRDKVESWE-A-ANK----------
>752555.PBR_1910
------------------MKQKFNVITSSCIPLPLENVDTDQIIPARFLK
AIDK-----KG--MGENLFRDWRYNA-DGSPKADFVMNDPS-YS-G-VIL
VAGKNFGSGSSREHAAWAIAGAGFRVVISSFFADIHKNNELNNLV-LPVV
VSENFLKELFDTIDGNHQAQVKVDLPNQTVT--NLTT----GHS--EQFE
INGYKKHCLENGL-DDVDFLVQNRDKVEAWE-L-ANK----------
>537011.PREVCOP_04101
------------------MKQKFNVITSSCIPLPLENVDTDQIIPARFLK
AIDK-----EG--MGDNLFRDWRYNA-DGTPKPDFVMNDPS-YS-G-VIL
VAGKNFGSGSSREHAAWAIAGAGFRVVISSFFADIHKNNELNNLV-LPVV
VSEEFLKELFESIDKDHKTEVKVDLPNQTVT--NLAT----GKS--EHFE
INGYKKHCLENGL-DDVDFLVQNRDKVEAWE-A-KNK----------
>585502.HMPREF0645_2330
------------------MKQKFDIITSSCIPLPLENVDTDQIIPARFLK
ATDK-----EG--FGDNLFRDWRYDK-DGNPNPDFVLNDPS-YS-G-VIL
VAGKNFGSGSSREHAAWAIAGYGFRVVISSFFADIHKNNELNNFV-LPVV
VSEDFLQELFRTIEKDHQSKVEVDLPNQTVT--NLAT----GRS--EHFE
INGYKKHCLMNGL-DDVDFLVRNLDKVEEYE-R-KRANEC-------
>908937.HMPREF9136_0628
------------------MKQKFDIITSSCIPLPLENVDTDQIIPARFLK
ATDK-----KG--FGDNLFRDWRYNK-DGSLKADFVLNDPS-YS-G-VIL
VAGKNFGSGSSREHAAWAIAGYGFRVVISSFFADIHKNNELNNFV-LPVV
VSEEFLQELFRSIDKDHRTEVRVDLPNQTVT--NLAT----GHS--EHFD
INGYKKHCLMNGL-DDVDFLVENRIKVEAYE-R-KQA----------
>203275.BFO_0822
-------------------MDKFQTLTSTCVPLPIENVDTDQIIPARFLK
ATTR-----EG--FGNNLFADWRYHK-DGSPKSDFVLNNPT-YS-G-QVL
VAGKNFGSGSSREHAAWAIAGYGFKVVVSSFFADIFRNNALNNGI-LPVV
TSEGCLSELFASIHNNPKATVTVNLEEQTIR--NNET----GTS--ESFE
INSYKKECLLKGL-DDIDFLLSNQSLTEAWE-SRANRF---------
>694427.Palpr_0055
-------------------MEKFITLTSSVVPLPIENVDTDQIIPARFLK
ATNK-----DG--FGDNLFADWRYNK-DGSPKADFVLNNST-YS-G-SIL
VAGKNFGSGSSREHAAWAIDGYGFKVVVSSFFADIFRGNALNNGV-LPVV
VTPEFLAEVFSCVNADPKTTLTIDLKNQTVS--NNAT----GKS--ETFE
INAYKKECLLNGL-DDIDYLLSKKEQIEQFE-K-ARV----------
>742766.HMPREF9455_00151
-------------------MEKFQTLTSTYVPLPIENVDTDQIIPARFLK
ATDK-----EG--FGNNLFADWRYNK-DGSPKADFVLNNPT-YS-G-QIL
VAGKNFGSGSSREHAAWAVAGYGFRAVVSSFFADIFRNNSLNNGV-LPVV
VTPEFLAEIFASVNADPKATLTIDLENQTIT--NNAT----GKL--ESFE
INPYKKECLLKGL-DDIDYLLSKKEMTEEYE-K-EHTL---------
>742767.HMPREF9456_01623
-------------------MEKFQTLTSTYVPLPIENVDTDQIIPARFLK
ATDK-----EG--FGDNLFADWRYNK-DGSPKADFVLNDST-YS-G-QIL
VAGKNFGSGSSREHAAWAVAGYGFKAVVSSFFADIFRNNSLNNGV-LPVV
VTPEFLSEIFACVNADPKATLTINLEKQTIT--NNVT----GKT--ESFE
INPYKKECLLKGL-DDIDYLLSKKELTEKYE-T-ERPL---------
>411154.GFO_2097
-M------------------EKFITLKDTVVPLDAENVDTDQIIPARFLK
ATDK-----EG--FGENLFRDWRFDK-NGDPIEDFVLNQDK-YS-GS-IL
LAGNNFGCGSSREHAAWAIKAYGFKAVVSSYFADIFKGNALNNGL-LPVQ
VCPEFLTKLFVAIEKDQNEKISIDLEAQKIK--IESS----GES--ESFD
IDSYKKTCLINGY-DDIDFLTSKLEAIKKFE-QKRRGKENVPQ-ETI
>655815.ZPR_1692
-M------------------EKFTTLQDTAVPLEVENIDTDQIIPARFLK
ATDK-----AG--FGENLFKDWRFDK-DGKPVEDFSLNQDQ-YS-GQ-IL
IAGNNFGCGSSREHAAWALKAYGFKVVVSSYFADIFKGNALNNGL-LPVQ
VSPEFLDELFLAIKKDNKESFKVDLENQKIQ--IISS----GKS--ENFA
IDAYKKTCLINGF-DDIDFLVSKLDAIKKFE-E-KQTQMREAAIQ-E
>50743.SCB49_05305
-M------------------EKFTKITSTAVPLDIENIDTDQIIPARFLK
ATDK-----QG--FGNNVFRDWRYDN-LGNVNPEFIFNNPS-YK-GK-IL
VAGNNFGCGSSREHAAWALVDYGFKVIVSSYFADIFKGNSLNNGL-LPIQ
VSETFLKKLMEILIAEPTVQLEVDLEKQHIS--VIEK----NIS--EFFE
IDTFKKNCLINGY-DDIDFLLSKREAIKEFE-L-SRN----------
>398720.MED217_10954
-M------------------EKFTKLTDTAVPLPIENIDTDQIIPARFLK
STDK-----KG--FGDNVFRDWRFDQ-KGEKNEDFVLNDPT-YS-GP-IL
VAGDNFGCGSSREHAAWAIAGYGFKVVISSFFADIFKGNALNNGI-LPIQ
VTPEYLKELLALVTEKPDTKLTIDLENQLLS--TPA--G---KL---EFE
IDPYKKVCMINGY-DDIDFLISKKEKIEAFE-Q-ERSF---------
>313590.MED134_11966
-M------------------EKFTKLVSTAVPLPIENIDTDQIIPARFLK
ATDK-----KG--FGDNVFRDWRFKK-DGTLDAEFPINKPQ-YA-GAKIL
VAGDNFGCGSSREHAAWAIVGYGFKVVISSFFADIFKGNALNNGL-LPIQ
VTPEYLKELLAGIEANPELPITIDLENQVVE--MAEVYAEQGRSTKAEFE
IDPYKKVCMINGY-DDIDFLLSKKAEIEAFE-K-ERMVF--------
>983548.Krodi_2179
-M------------------EKFTKLISTAVPLAIENIDTDQIIPARFLK
ATDK-----KG--FGDNVFRDWRFKK-DGTLDAEFPINKPQ-YA-GAKIL
VAGDNFGCGSSREHAAWAIVGYGFKVVISSFFADIFKGNALNNGL-LPIQ
VTPEYLKELLANIEANPKLPITIDLENQVVE--MAVVYAEQGRSKKAKFD
IDPYKKVCMINGY-DDIDFLLSKKAEIEAFE-K-ERMVF--------
>1034807.FBFL15_2593
-M------------------EKFIKLKSKAVPLPIENIDTDQIIPARFLK
VTDK-----VG--FGNHLFKDWRFDD-HNLPITSFVLNNND-YS-GA-IL
VAGDNFGCGSSREHAAWALADYGFKVVVSSYFADIFKGNALNNGI-LPIL
VSPDFLKQIFDHIQADSQTNLIVDLENQEIA--IENT----PLK--EPFE
IDPYKKICMINGF-DDIDFLISKKAEIEAFE-K-NR-----------
>926562.Oweho_2471
-M------------------EKFVKLHSTAVPLPIENIDTDQIIPARFLK
ATNK-----VG--FGANLFRDWRYDG-EGKPLTNFVLNDLT-YG-GH-IL
LAGDNFGCGSSREHAAWALADYGFKVVVSSYFADIFKGNALNNGI-LPIQ
VSPEFLAEALDRVRRNPCLKIVVDLENQTIS--VEE------LN--EHFE
IDSYKKLCLMNGY-DDIDFLISRKTKIEAFE-A-SKSLSYGV-----
>313595.P700755_00452
-M------------------EKFTTLNSRAIPLDIENVDTDQIIPARFLK
TTSR-----EG--FGENLFRDWRYDK-KGSERSDFILNDKL-YS-GS-VL
IAGDNFGCGSSREHAAWALSDYGFKAIVSSFFADIFKGNALNNGL-LPIQ
VSPDFLKKIMKLISEKPETLVRVDLESQTIS--IENS----KLK--ESFK
IDTYKKTCMINGY-DDIDFLLSKKNKIEHFE-N-QRKLLNVYD----
>391603.FBALC1_02737
-M------------------EKFTTLKSTAIPLNIENVDTDQIIPARFLK
ATDK-----KG--FGDNVFRDWRYNK-DGSENSEFILNDSK-YS-GS-IL
VAGDNFGCGSSREHAAWAIVGYGFKVVVSSFFADIFKGNALNNGL-LPVQ
VSETFLSDLLSKIVSNPETEIDVNLEKQTIS--IVGS----DTS--EDFE
IDAYKKTCMINGY-DDIDYLINNKEQIEAFE-A-HKIY---------
>983544.Lacal_0597
-M------------------EKFTTLHSKAIPLQIENVDTDQIIPARFLK
ATDK-----QG--FGDNVFRDWRYNK-DNTLNIDFALNNPN-HS-GS-IL
VAGDNFGCGSSREHAAWALTGYGFKVVVSSFFADIFKGNALNNGL-LPVQ
VSKAFLNTLFKSIKKDSNINIIVNLEAQTIA--IENT----EHV--AHFE
INSYKKTCLINGY-DDIDFLLSKKAKIEAFE-I-SLN----------
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