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PhyloToL-6

An updated version of PhyloToL started in 2023

PTL1 includes scripts for assigning transcripts and cds' to gene familes (OGs)

PTL2 is a repository for main MSA and tree building scripts

HookDB is our set of eukaryotic gene families, a subsample of gene families from orthomcl 6

Utilities includes many useful tools for analyzing sequence data.