Katzlab dd76ab1d12 Added PTL2 Scripts
These are PTL2 files from Auden 2/9
2023-02-14 11:20:52 -05:00

25 lines
514 B
C++

// $Id: fastStartTree.h 962 2006-11-07 15:13:34Z privmane $
#ifndef ___FAST_START_TREE
#define ___FAST_START_TREE
#include "definitions.h"
#include "tree.h"
#include "stochasticProcess.h"
#include "sequenceContainer.h"
#include <iostream>
using namespace std;
tree getBestMLTreeFromManyNJtrees(sequenceContainer & allTogether,
stochasticProcess& sp,
const int numOfNJtrees,
const MDOUBLE tmpForStartingTreeSearch,
const MDOUBLE epslionWeights,
ostream& out);
#endif