Katzlab dd76ab1d12 Added PTL2 Scripts
These are PTL2 files from Auden 2/9
2023-02-14 11:20:52 -05:00

16 lines
317 B
Tcsh

#! /bin/tcsh -f
echo "SEMPHY with Constraints from given tree"
foreach ct (lys_test*.ctree)
echo $ct
cat $ct
echo ""
echo 'Running "../semphy -H -s lys6.seq -t lys6.tree --jtt -c '$ct' -v5 -S"'
echo ""
../semphy -H -s lys6.seq -t lys6.tree --jtt -c $ct -v5 -S
echo ""
echo ""
end