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51 lines
1.7 KiB
Makefile
51 lines
1.7 KiB
Makefile
CODE = main.cpp
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NAME = trimal
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CODE2 = readAl.cpp
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NAME2 = readal
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CODE3 = statAl.cpp
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NAME3 = statal
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CC = g++
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FLAGS = -Wall -O2
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LIBM = -lm
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DUGB =
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all: readal trimal statal
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preview: alignment.o statisticsGaps.o utils.o similarityMatrix.o statisticsConservation.o sequencesMatrix.o compareFiles.o
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trimal: preview
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$(CC) $(FLAGS) $(DUGB) -o $(NAME) $(CODE) $(LIBM) alignment.o statisticsGaps.o utils.o similarityMatrix.o statisticsConservation.o sequencesMatrix.o compareFiles.o
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readal: preview
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$(CC) $(FLAGS) $(DUGB) -o $(NAME2) $(CODE2) $(LIBM) alignment.o statisticsGaps.o utils.o similarityMatrix.o statisticsConservation.o sequencesMatrix.o compareFiles.o
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statal: preview
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$(CC) $(FLAGS) $(DUGB) -o $(NAME3) $(CODE3) $(LIBM) alignment.o statisticsGaps.o utils.o similarityMatrix.o statisticsConservation.o sequencesMatrix.o compareFiles.o
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alignment.o: alignment.cpp rwAlignment.cpp autAlignment.cpp alignment.h values.h defines.h
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$(CC) $(FLAGS) $(DUGB) -c alignment.cpp rwAlignment.cpp autAlignment.cpp
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statisticsGaps.o: statisticsGaps.cpp statisticsGaps.h
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$(CC) $(FLAGS) $(DUGB) -c statisticsGaps.cpp
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sequencesMatrix.o: sequencesMatrix.cpp sequencesMatrix.h
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$(CC) $(FLAGS) $(DUGB) -c sequencesMatrix.cpp
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statisticsConservation.o: statisticsConservation.cpp statisticsConservation.h
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$(CC) $(FLAGS) $(DUGB) -c statisticsConservation.cpp
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similarityMatrix.o: similarityMatrix.cpp similarityMatrix.h values.h
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$(CC) $(FLAGS) $(DUGB) -c similarityMatrix.cpp
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utils.o: utils.cpp utils.h values.h defines.h
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$(CC) $(FLAGS) $(DUGB) -c utils.cpp
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compareFiles.o: compareFiles.cpp compareFiles.h
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$(CC) $(FLAGS) $(DUGB) -c compareFiles.cpp
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clean:
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-rm -f $(NAME) $(NAME2) $(NAME3) *.o *~
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