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12 lines
454 B
Python
12 lines
454 B
Python
import os, sys
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from Bio import SeqIO
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nucls = { rec.id : str(rec.seq) for rec in SeqIO.parse('AllCuratedNTDSeqs_020722_previous.fasta', 'fasta') }
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with open('AllCuratedNTDSeqs_022222_Seq0.7.fasta', 'w') as o:
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for file in os.listdir('SeqFiltered_ToAlign/Preguidance_0.7_Aligned'):
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if('.fas' in file):
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for rec in SeqIO.parse('SeqFiltered_ToAlign/Preguidance_0.7_Aligned/' + file, 'fasta'):
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o.write('>' + rec.id + '\n' + nucls[rec.id] + '\n\n')
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