Katzlab dd76ab1d12 Added PTL2 Scripts
These are PTL2 files from Auden 2/9
2023-02-14 11:20:52 -05:00

68 lines
1.7 KiB
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creating a bootstrap object from a file
first constractor
5 size =2 0 1 | 2 3 4 5
1 size =3 0 1 2 | 3 4 5
1 size =2 0 1 2 3 | 4 5
2 size =2 0 1 2 5 | 3 4
1 size =2 0 1 3 5 | 2 4
1 size =2 0 1 4 5 | 2 3
4 size =3 0 1 5 | 2 3 4
secound constractor
5 size =2 0 1 | 2 3 4 5
1 size =3 0 1 2 | 3 4 5
1 size =2 0 1 2 3 | 4 5
2 size =2 0 1 2 5 | 3 4
1 size =2 0 1 3 5 | 2 4
1 size =2 0 1 4 5 | 2 3
4 size =3 0 1 5 | 2 3 4
geing whights from a tree
0 1 0 0 0.8 0 0.4 0 0 0
checkout the support of a tree
((Baboon,Human)[1],(Rat,(Langur,Cow)[0.4])[0.8],Horse);
remove the first tree from the list, and use is as bases for additional computation
5 size =2 0 1 | 2 3 4 5
1 size =2 0 1 2 3 | 4 5
1 size =2 0 1 2 5 | 3 4
1 size =3 0 1 3 | 2 4 5
1 size =2 0 1 3 5 | 2 4
2 size =2 0 1 4 5 | 2 3
4 size =3 0 1 5 | 2 3 4
0 1 0 0 0.8 0 0.2 0 0 0
checkout the support of the removed tree
((Baboon,Human)[1],(Rat,(Langur,Cow)[0.2])[0.8],Horse);
compatability 0.5 = Majority Rule
from the consensus
(Cow:0.300000,Langur:0.300000,Rat:0.300000,(Horse:0.300000,(Baboon:0.300000,Human:0.300000):0.000001):0.000001);
with support
(Cow,Langur,Rat,(Horse,(Baboon,Human)[1])[0.8]);
compatability 0.1
from the consensus
(Cow:0.3,Langur:0.3,(Rat:0.3,(Horse:0.3,(Baboon:0.3,Human:0.3):1e-06):1e-06):1e-06);
with support
(Cow,Langur,(Rat,(Horse,(Baboon,Human)[1])[0.8])[0.4]);
compatability 0.9
from the consensus
(Cow:0.3,Horse:0.3,Langur:0.3,Rat:0.3,(Baboon:0.3,Human:0.3):1e-06);
with support
(Cow,Horse,Langur,Rat,(Baboon,Human)[1]);
strict consensus
from the consensus
(Cow:0.3,Horse:0.3,Langur:0.3,Rat:0.3,(Baboon:0.3,Human:0.3):1e-06);
with support
(Cow,Horse,Langur,Rat,(Baboon,Human)[1]);