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17 lines
675 B
Plaintext
17 lines
675 B
Plaintext
likelihood computation after branch-length optimisation, gamma=0.742
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#################################################################
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# SEMPHY: A Structural EM Algorithm for Phylogenetic Inference #
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# for information, please send email to semphy@cs.huji.ac.il #
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#################################################################
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argv = "../semphy" "-s" "lys6.seq" "-t" "lys6.tree" "-n" "--jtt" "-A0.742"
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# The likelihood of the tree
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-1037.96
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# The likelihood of the tree
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-1037.96
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# The log likelihood of the tree is:
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-1037.96
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-1037.96
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# The tree
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(((Langur:0.083206,Baboon:0.032530):0.016684,Human:0.069512):0.000999,Rat:0.355865,(Cow:0.273729,Horse:0.933000):0.116610);
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