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23 lines
952 B
C++
23 lines
952 B
C++
#ifndef ___COMPUTE_POSTERIOR_EXPECTATION_OF_SUBSTITUTIONS_NONREVERSIBLESP
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#define ___COMPUTE_POSTERIOR_EXPECTATION_OF_SUBSTITUTIONS_NONREVERSIBLESP
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#include "computePosteriorExpectationOfSubstitutions.h"
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class computePosteriorExpectationOfSubstitutions_nonReversibleSp:public computePosteriorExpectationOfSubstitutions {
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public:
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explicit computePosteriorExpectationOfSubstitutions_nonReversibleSp(const tree &tr, const sequenceContainer &sc, stochasticProcess *sp):computePosteriorExpectationOfSubstitutions(tr,sc,sp){}
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virtual ~computePosteriorExpectationOfSubstitutions_nonReversibleSp(){};
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void computePosteriorOfChangeGivenTerminals(VVVdouble &posteriorPerNodePer2States, int pos);
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private:
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MDOUBLE computePosterioGivenTerminalsPerBranch (int nodeId,int sonState, int fatherState,suffStatGlobalHomPos &sscUp,
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suffStatGlobalGamPos &sscDown,computePijHom &pi, MDOUBLE &LLData, const string nodeName);
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};
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#endif
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