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25 lines
593 B
C
25 lines
593 B
C
// $Id: findRateOfGene.h 962 2006-11-07 15:13:34Z privmane $
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#ifndef ____FIND_RATE_OF_GENE
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#define ____FIND_RATE_OF_GENE
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#include "numRec.h"
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#include "errorMsg.h"
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#include "likelihoodComputation.h"
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#include "tree.h"
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#include "sequenceContainer.h"
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#include "stochasticProcess.h"
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#include "suffStatComponent.h"
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#include "definitions.h"
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MDOUBLE findTheBestFactorFor(const tree &t,
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const sequenceContainer& sc,
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stochasticProcess& sp,
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const Vdouble * weights,
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MDOUBLE & logLresults);
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void makeAverageRateEqOne(tree& et,vector<stochasticProcess> & spVec);
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#endif
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