mirror of
http://43.156.76.180:8026/YuuMJ/EukPhylo.git
synced 2025-12-28 05:40:26 +08:00
17 lines
523 B
C++
17 lines
523 B
C++
// $Id: treeInference.cpp 962 2006-11-07 15:13:34Z privmane $
|
|
#include "treeInference.h"
|
|
#include "likeDist.h"
|
|
#include "distanceTable.h"
|
|
|
|
tree treeInference::computeNJtreeWithLikeDist(const stochasticProcess &sp, const sequenceContainer &sc,
|
|
const tree * const constraintTreePtr, const vector<MDOUBLE> * const weights) {
|
|
|
|
likeDist ld( sp, 0.01);
|
|
VVdouble disTab;
|
|
vector<string> vNames;
|
|
giveDistanceTable(&ld,sc,disTab,vNames,weights);
|
|
NJalg nj1;
|
|
return (nj1.computeTree(disTab,vNames,constraintTreePtr));
|
|
}
|
|
|