diff --git a/EukPhylo-Part-2:-MSAs,-trees,-and-contamination-loop.md b/EukPhylo-Part-2:-MSAs,-trees,-and-contamination-loop.md index e3177d2..6a950d9 100644 --- a/EukPhylo-Part-2:-MSAs,-trees,-and-contamination-loop.md +++ b/EukPhylo-Part-2:-MSAs,-trees,-and-contamination-loop.md @@ -133,7 +133,7 @@ After homology assessment and building MSAs (the Guidance step), EukPhylo trims Argument | Default | Choices | Description -- | -- | -- | -- ---tree_method | iqtree | iqtree, raxml, fasttree | Program to use for tree-building. +--tree_method | iqtree | iqtree, iqtree_fast, raxml, fasttree | Program to use for tree-building. ## Contamination loop