From 006706de5a274c72d35c4629e1b18b9b3ca6a5da Mon Sep 17 00:00:00 2001
From: Auden Cote-L'Heureux <52716489+AudenCote@users.noreply.github.com>
Date: Wed, 22 Jan 2025 13:01:39 -0500
Subject: [PATCH] Updated EukPhylo Part 2: MSAs, trees, and contamination loop
 (markdown)

---
 EukPhylo-Part-2:-MSAs,-trees,-and-contamination-loop.md | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/EukPhylo-Part-2:-MSAs,-trees,-and-contamination-loop.md b/EukPhylo-Part-2:-MSAs,-trees,-and-contamination-loop.md
index e3177d2..6a950d9 100644
--- a/EukPhylo-Part-2:-MSAs,-trees,-and-contamination-loop.md
+++ b/EukPhylo-Part-2:-MSAs,-trees,-and-contamination-loop.md
@@ -133,7 +133,7 @@ After homology assessment and building MSAs (the Guidance step), EukPhylo trims
  
 Argument | Default | Choices | Description
 -- | -- | -- | --
---tree_method | iqtree | iqtree, raxml, fasttree | Program to use for tree-building.
+--tree_method | iqtree | iqtree, iqtree_fast, raxml, fasttree | Program to use for tree-building.
 
 ## Contamination loop