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Updated QuickStart EukPhylo (markdown)
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* log.txt = if added to the end of the command, it will output a log file with progress, warning, or error messages
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* log.txt = if added to the end of the command, it will output a log file with progress, warning, or error messages
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### Output:
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### Output:
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ReadyToGo = AA, NTD
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* ReadyToGo = AA, NTD
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Sequences summary
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* Sequences summary
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### Modularity of options and replacing the Hook database
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### Modularity of options and replacing the Hook database
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EukPhylo part 1 for genomes is composed of 5 scripts. User can choose to start or stop at each step by changing the -1 and/or -2 options.
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EukPhylo part 1 for genomes is composed of 5 scripts. User can choose to start or stop at each step by changing the -1 and/or -2 options.
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