diff --git a/PhyloToL-Part-1:-GF-assignment.md b/PhyloToL-Part-1:-GF-assignment.md index 85ab19d..c572570 100644 --- a/PhyloToL-Part-1:-GF-assignment.md +++ b/PhyloToL-Part-1:-GF-assignment.md @@ -72,10 +72,10 @@ Role of each script * Main inputs : A folder containing the assembled transcripts, a folder containing the Databases, and a folder containing the scripts. -* *Optional inputs : Gcodes.txt and Conspecific.txt -* Outputs : ReadyToGo files (AA and NTD), taxon summary, and sequence summary. -* *The Gcodes.txt is a tab separated txt file containing the genetic code of the taxa. This will most likely not be needed except for some organisms like ciliates. -* Example: +* Outputs : ReadyToGo files (AA and NTD), taxon summary, and sequence summary. +** *Optional inputs : Gcodes.txt and Conspecific.txt +** *The Gcodes.txt is a tab separated txt file containing the genetic code of the taxa. This will most likely not be needed except for some organisms like ciliates. +*** Example: | Taxa | Genetic code | | ----------- | --------- |